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改进的高力磁镊,用于拉伸和重折叠蛋白质和短 DNA。

Improved high-force magnetic tweezers for stretching and refolding of proteins and short DNA.

机构信息

Mechanobiology Institute, National University of Singapore, Singapore.

出版信息

Biophys J. 2011 Jan 19;100(2):517-23. doi: 10.1016/j.bpj.2010.12.3700.

DOI:10.1016/j.bpj.2010.12.3700
PMID:21244848
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3325116/
Abstract

Although magnetic tweezers have many unique advantages in terms of specificity, throughput, and force stability, this tool has had limited application on short tethers because accurate measurement of force has been difficult for short tethers under large tension. Here, we report a method that allows us to apply magnetic tweezers to stretch short biomolecules with accurate force calibration over a wide range of up to 100 pN. We demonstrate the use of the method by overstretching of a short DNA and unfolding/refolding a protein of filamin A immunoglobulin domains 1-8. Other potential applications of this method are also discussed.

摘要

尽管磁镊在特异性、通量和力稳定性方面具有许多独特的优势,但由于在大张力下难以对短系绳进行精确的力测量,因此该工具在短系绳上的应用受到限制。在这里,我们报告了一种方法,该方法允许我们在高达 100 pN 的广泛范围内对短生物分子进行精确的力校准和拉伸。我们通过过度拉伸短 DNA 和展开/折叠纤连蛋白免疫球蛋白结构域 1-8 的蛋白质来演示该方法的用途。还讨论了该方法的其他潜在应用。

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Biophys J. 2011 Jan 19;100(2):517-23. doi: 10.1016/j.bpj.2010.12.3700.
2
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本文引用的文献

1
Quantitative guidelines for force calibration through spectral analysis of magnetic tweezers data.通过磁镊数据的光谱分析进行力校准的定量指南。
Biophys J. 2010 Aug 9;99(4):1292-302. doi: 10.1016/j.bpj.2010.06.008.
2
Two distinct overstretched DNA states.两种截然不同的拉伸 DNA 状态。
Nucleic Acids Res. 2010 Sep;38(16):5594-600. doi: 10.1093/nar/gkq309. Epub 2010 Apr 30.
3
Active and passive mechanisms of helicases.解旋酶的主动和被动机制。
Nucleic Acids Res. 2010 Sep;38(16):5518-26. doi: 10.1093/nar/gkq273. Epub 2010 Apr 27.
4
Quantifying DNA melting transitions using single-molecule force spectroscopy.使用单分子力谱法对DNA解链转变进行定量分析。
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5
The structure of DNA overstretched from the 5'5' ends differs from the structure of DNA overstretched from the 3'3' ends.从5'5'端过度拉伸的DNA结构与从3'3'端过度拉伸的DNA结构不同。
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13196-201. doi: 10.1073/pnas.0904729106. Epub 2009 Jul 28.
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Quantitative modeling and optimization of magnetic tweezers.磁镊的定量建模与优化
Biophys J. 2009 Jun 17;96(12):5040-9. doi: 10.1016/j.bpj.2009.03.055.
7
Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber.单分子力谱揭示了30纳米染色质纤维高度柔顺的螺旋折叠结构。
Nat Struct Mol Biol. 2009 May;16(5):534-40. doi: 10.1038/nsmb.1590. Epub 2009 Apr 19.
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Torsional stiffness of single superparamagnetic microspheres in an external magnetic field.单个超顺磁性微球在外部磁场中的扭转刚度。
Phys Rev Lett. 2009 Jan 16;102(2):028302. doi: 10.1103/PhysRevLett.102.028302. Epub 2009 Jan 13.
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Effects of kink and flexible hinge defects on mechanical responses of short double-stranded DNA molecules.扭结和柔性铰链缺陷对短双链DNA分子力学响应的影响。
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Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy.单分子力谱学:光镊、磁镊和原子力显微镜。
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