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人类内源性逆转录病毒(HERV)组 HML-2/HERV-K 的表达不依赖于典型的启动子元件,而是受转录因子 Sp1 和 Sp3 调控。

Expression of the human endogenous retrovirus (HERV) group HML-2/HERV-K does not depend on canonical promoter elements but is regulated by transcription factors Sp1 and Sp3.

机构信息

Paul Ehrlich Institut, Federal Institute for Vaccines and Biomedicines, Paul-Ehrlich-Strasse 51-59, D-63225 Langen, Germany.

出版信息

J Virol. 2011 Apr;85(7):3436-48. doi: 10.1128/JVI.02539-10. Epub 2011 Jan 19.

Abstract

After fixation in the human genome, human endogenous retroviruses (HERVs) are bona fide cellular genes despite their exogenous origin. To be able to spread within the germ line and the early embryo, the ancient retroviral promoters must have adapted to the requirements for expression in these cell types. We describe that in contrast to the case for current exogenous retroviruses, which replicate in specific somatic cells, the long terminal repeat (LTR) of the human endogenous retrovirus HERV-K acts as a TATA- and initiator element-independent promoter with a variable transcription start site. We present evidence that the HERV-K LTR is regulated by the transcription factors Sp1 and Sp3. Mutating specific GC boxes, which are binding sites for Sp proteins, and knocking down Sp1 and Sp3 by use of small interfering RNA (siRNA) significantly reduced the promoter activity. Binding of Sp1 and Sp3 to the promoter region was confirmed using electrophoretic mobility shift assays (EMSAs) and chromatin immunoprecipitation (ChIP). Our data explain why certain HERV-K proviruses have lost promoter competence. Since vertebrate promoters lacking canonical core promoter elements are common but poorly studied, understanding the HERV-K promoter not only will provide insight into the regulation of endogenous retroviruses but also can serve as a paradigm for understanding the regulation of this class of cellular genes.

摘要

在人类基因组中固定后,尽管人类内源性逆转录病毒(HERV)具有外源起源,但它们是真正的细胞基因。为了能够在生殖系和早期胚胎中传播,古老的逆转录病毒启动子必须适应在这些细胞类型中表达的要求。我们描述了与当前在特定体细胞中复制的外源逆转录病毒相反的情况,人类内源性逆转录病毒 HERV-K 的长末端重复(LTR)不作为 TATA 和起始子元件独立的启动子,具有可变的转录起始位点。我们提供的证据表明,HERV-K LTR 受转录因子 Sp1 和 Sp3 的调节。通过使用小干扰 RNA(siRNA)突变特定的 GC 盒(Sp 蛋白的结合位点),并敲低 Sp1 和 Sp3,显著降低了启动子活性。使用电泳迁移率变动分析(EMSA)和染色质免疫沉淀(ChIP)证实了 Sp1 和 Sp3 与启动子区域的结合。我们的数据解释了为什么某些 HERV-K 前病毒失去了启动子能力。由于缺乏典型核心启动子元件的脊椎动物启动子很常见但研究甚少,因此了解 HERV-K 启动子不仅将提供对内源性逆转录病毒调节的深入了解,而且可以作为理解此类细胞基因调节的范例。

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