Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley 6009 WA, Australia.
Plant J. 2011 Feb;65(4):532-42. doi: 10.1111/j.1365-313X.2010.04441.x. Epub 2011 Jan 4.
Over 20 proteins of the pentatricopeptide repeat (PPR) family have been demonstrated to be involved in RNA editing in plant mitochondria and chloroplasts. All of these editing factors contain a so-called 'E' domain that has been shown to be essential for editing to occur. The presumption has been that this domain recruits the (unknown) editing enzyme to the RNA. In this report, we show that not all putative E-class PPR proteins are directly involved in RNA editing. Disruption of the OTP70 gene leads to a strong defect in splicing of the plastid transcript rpoC1, leading to a virescent phenotype. The mutant has a chloroplast transcript pattern characteristic of a reduction in plastid-encoded RNA polymerase activity. The E domain of OTP70 is not required for splicing, and can be deleted or replaced by the E domain from the known editing factor CRR4 without loss of rpoC1 splicing. Furthermore, the E domain of OTP70 is incapable of inducing RNA editing when fused to the RNA binding domain of CRR4. We conclude that the truncated E domain of OTP70 is no longer functional in RNA editing, and that the protein has acquired a new function in promoting RNA splicing.
超过 20 种五肽重复(PPR)家族的蛋白质已被证明参与植物线粒体和叶绿体中的 RNA 编辑。所有这些编辑因子都包含一个所谓的“E 结构域”,该结构域对于编辑的发生至关重要。人们推测,这个结构域将(未知的)编辑酶招募到 RNA 上。在本报告中,我们表明并非所有假定的 E 类 PPR 蛋白都直接参与 RNA 编辑。OTP70 基因的破坏导致质体转录本 rpoC1 的剪接严重缺陷,导致黄化表型。突变体具有典型的减少质体编码 RNA 聚合酶活性的质体转录本模式。OTP70 的 E 结构域对于剪接不是必需的,可以被已知的编辑因子 CRR4 的 E 结构域缺失或替换,而不会导致 rpoC1 剪接丢失。此外,OTP70 的 E 结构域与 CRR4 的 RNA 结合结构域融合时,不能诱导 RNA 编辑。我们得出结论,OTP70 的截断 E 结构域在 RNA 编辑中不再起作用,并且该蛋白在促进 RNA 剪接方面获得了新的功能。