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建议将从海豹中分离到的拟豪氏菌属 Hudsonensis 新属新种和一个额外的基因种作为巴斯德氏菌科的新成员。

Proposal of Bisgaardia hudsonensis gen. nov., sp. nov. and an additional genomospecies, isolated from seals, as new members of the family Pasteurellaceae.

机构信息

SAC Consulting Veterinary Services, Inverness, UK.

College of Veterinary Medicine, University of Montreal, Canada.

出版信息

Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):3016-3022. doi: 10.1099/ijs.0.028027-0. Epub 2011 Feb 4.

Abstract

Phenotypic and phylogenetic studies were performed on eight Gram-negative-staining, rod-shaped bacteria isolated from seals. Biochemical and physiological studies showed identical profiles for all of the isolates and indicated that they were related to the family Pasteurellaceae. 16S rRNA gene sequencing demonstrated that the organism represented a distinct cluster with two sublines within the family Pasteurellaceae with <96% sequence similarity to any recognized species. Multilocus sequence analysis (MLSA) including rpoB, infB and recN genes further confirmed these findings with the eight isolates forming a genus-like cluster with two branches. Genome relatedness as deduced from recN gene sequences suggested that the isolates represented a new genus with two species. On the basis of the results of the phylogenetic analysis and phenotypic criteria, it is proposed that these bacteria from seals are classified as Bisgaardia hudsonensis gen. nov., sp. nov. (the type species) and Bisgaardia genomospecies 1. The G+C content of the DNA was 39.5 mol%. The type strain of Bisgaardia hudsonensis gen. nov., sp. nov. is M327/99/2(T) (=CCUG 43067(T)=NCTC 13475(T)=98-D-690B(T)) and the reference strain of Bisgaardia genomospecies 1 is M1765/96/5 (=CCUG 59551=NCTC 13474).

摘要

对从海豹中分离出的 8 株革兰氏阴性、杆状细菌进行了表型和系统发育研究。生化和生理研究表明,所有分离株的表型都相同,表明它们与巴斯德氏菌科有关。16S rRNA 基因测序表明,该生物代表了巴斯德氏菌科内一个具有两个亚系的独特聚类,与任何公认的物种的序列相似性均<96%。包括 rpoB、infB 和 recN 基因的多位点序列分析 (MLSA) 进一步证实了这些发现,8 个分离株形成了一个类似于属的聚类,有两个分支。根据 recN 基因序列推断的基因组相关性表明,这些分离株代表了一个具有两个种的新属。基于系统发育分析和表型标准的结果,建议将海豹中的这些细菌分类为 Bisgaardia hudsonensis gen. nov.,sp. nov.(模式种)和 Bisgaardia genomospecies 1。DNA 的 G+C 含量为 39.5 mol%。Bisgaardia hudsonensis gen. nov.,sp. nov.的模式株为 M327/99/2(T)(=CCUG 43067(T)=NCTC 13475(T)=98-D-690B(T)),Bisgaardia genomospecies 1 的参考株为 M1765/96/5(=CCUG 59551=NCTC 13474)。

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