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含南极视紫红质的黄杆菌湖栖吉利氏菌模式菌株(R-8282(T))的基因组序列。

Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

作者信息

Riedel Thomas, Held Brittany, Nolan Matt, Lucas Susan, Lapidus Alla, Tice Hope, Del Rio Tijana Glavina, Cheng Jan-Fang, Han Cliff, Tapia Roxanne, Goodwin Lynne A, Pitluck Sam, Liolios Konstantinos, Mavromatis Konstantinos, Pagani Ioanna, Ivanova Natalia, Mikhailova Natalia, Pati Amrita, Chen Amy, Palaniappan Krishna, Land Miriam, Rohde Manfred, Tindall Brian J, Detter John C, Göker Markus, Bristow James, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter, Woyke Tanja

机构信息

HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany.

出版信息

Stand Genomic Sci. 2012 Oct 10;7(1):107-19. doi: 10.4056/sigs.3216895.

Abstract

Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a member of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282(T) is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we describe the features of this organism, together with the permanent-draft genome sequence and annotation. The 3,966,857 bp long chromosome (two scaffolds) with its 3,569 protein-coding and 51 RNA genes is a part of the GenomicEncyclopedia of Bacteria and Archaea project.

摘要

林氏吉利斯菌(Gillisia limnaea)范·特拉彭等人于2004年发现,是吉利斯菌属的模式种,该菌属于特征明确的黄杆菌科。林氏吉利斯菌R-8282(T)的基因组是吉利斯菌属模式菌株的首个测序基因组(永久草图)。在此,我们描述该生物体的特征,以及永久草图基因组序列和注释。这个长度为3,966,857 bp的染色体(两个支架),含有3,569个蛋白质编码基因和51个RNA基因,是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/72d8/3570806/e7429345c1fc/sigs.3216895-f1.jpg

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