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生化反应网络中对相互通量敏感性的约束。

Constraints on reciprocal flux sensitivities in biochemical reaction networks.

机构信息

Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.

出版信息

Biophys J. 2011 Mar 16;100(6):1383-91. doi: 10.1016/j.bpj.2011.01.067.

Abstract

We identify a connection between the structural features of mass-action networks and the robustness of their steady-state fluxes against rate constant variations. We find that in all positive steady states of so-called injective networks-networks that arise, for example, in metabolic and gene regulation contexts-there are certain firm bounds on the flux control coefficients. In particular, the control coefficient of the flux of a reaction, with respect to variation in its own rate constant, is delimited in a precise way. Moreover, for each pair of reactions, the flux of at least one of them must have a precisely delimited control coefficient with respect to variation in the rate constant of the other. The derived bounds can, however, be violated in noninjective networks, so for them a more pronounced lack of robustness could be exhibited. These results, which indicate a mechanism by which some degree of robustness is induced in the injective setting, also shed light on how robustness might evolve.

摘要

我们发现,在质量作用网络的结构特征与其稳态通量对速率常数变化的鲁棒性之间存在着联系。我们发现,在所谓的注入网络(例如,在代谢和基因调控背景下出现的网络)的所有正稳态中,通量控制系数存在着一定的严格限制。具体来说,对于一个反应的通量,相对于其自身速率常数的变化,其控制系数是有限定的。此外,对于每一对反应,它们的通量中至少有一个的控制系数对于另一个反应的速率常数的变化必须有一个精确限定的限制。然而,这些推导出来的限制在非注入网络中可能会被违反,因此对于它们来说,可能会表现出更明显的缺乏鲁棒性。这些结果表明,在注入网络中存在一种诱导一定程度鲁棒性的机制,也揭示了鲁棒性可能是如何演变的。

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