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花生环斑病毒(呼肠孤病毒科,Tospovirus 属)依赖 RNA 的 RNA 聚合酶的分子特征。

Molecular characterization of the RNA-dependent RNA polymerase from groundnut ringspot virus (genus Tospovirus, family Bunyaviridae).

机构信息

Laboratory of Plant Virology, Department of Cellular Biology, Biological Sciences Institute, University of Brasília, Campus Universitário Darcy Ribeiro, Asa Norte, Brasília, Distrito Federal, 70910-900, Brazil.

出版信息

Arch Virol. 2011 Aug;156(8):1425-9. doi: 10.1007/s00705-011-0973-4. Epub 2011 Mar 26.

DOI:10.1007/s00705-011-0973-4
PMID:21442231
Abstract

Groundnut ringspot virus is a negative-sense single-stranded RNA virus that belongs to the genus Tospovirus and is the prevalent member of this genus in Brazil. This work presents the nucleotide sequence of the L RNA, with a single open reading frame of 2873 amino acids in the complementary strand corresponding to the RNA-dependent RNA polymerase (L protein), as well as the characterization of conserved domains of the L protein by in silico analysis. Phylogenetic analysis of different L protein domains confirmed that GRSV is a member of the American clade, and comparison with a N-protein indicates that phylogeny based on L protein sequences may be more reliable than that based on the N protein.

摘要

落花生环斑病毒是一种负义单链 RNA 病毒,属于布尼亚病毒科,是巴西流行的该属成员。本工作介绍了 L 核糖核酸的核苷酸序列,互补链上有一个单一的开放阅读框,编码 2873 个氨基酸,对应于 RNA 依赖性 RNA 聚合酶(L 蛋白),以及通过计算机分析对 L 蛋白保守结构域的特征描述。不同 L 蛋白结构域的系统发育分析证实,GRSV 是美洲分支的成员,与 N 蛋白的比较表明,基于 L 蛋白序列的系统发育可能比基于 N 蛋白的系统发育更可靠。

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