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微米尺寸的 X 射线光束可减少蛋白质晶体中的辐射损伤。

Radiation damage in protein crystals is reduced with a micron-sized X-ray beam.

机构信息

National Institute of General Medical Sciences and National Cancer Institute Collaborative Access Team, Biosciences Division, Argonne National Laboratory, Argonne, IL 60439, USA.

出版信息

Proc Natl Acad Sci U S A. 2011 Apr 12;108(15):6127-32. doi: 10.1073/pnas.1017701108. Epub 2011 Mar 28.

Abstract

Radiation damage is a major limitation in crystallography of biological macromolecules, even for cryocooled samples, and is particularly acute in microdiffraction. For the X-ray energies most commonly used for protein crystallography at synchrotron sources, photoelectrons are the predominant source of radiation damage. If the beam size is small relative to the photoelectron path length, then the photoelectron may escape the beam footprint, resulting in less damage in the illuminated volume. Thus, it may be possible to exploit this phenomenon to reduce radiation-induced damage during data measurement for techniques such as diffraction, spectroscopy, and imaging that use X-rays to probe both crystalline and noncrystalline biological samples. In a systematic and direct experimental demonstration of reduced radiation damage in protein crystals with small beams, damage was measured as a function of micron-sized X-ray beams of decreasing dimensions. The damage rate normalized for dose was reduced by a factor of three from the largest (15.6 μm) to the smallest (0.84 μm) X-ray beam used. Radiation-induced damage to protein crystals was also mapped parallel and perpendicular to the polarization direction of an incident 1-μm X-ray beam. Damage was greatest at the beam center and decreased monotonically to zero at a distance of about 4 μm, establishing the range of photoelectrons. The observed damage is less anisotropic than photoelectron emission probability, consistent with photoelectron trajectory simulations. These experimental results provide the basis for data collection protocols to mitigate with micron-sized X-ray beams the effects of radiation damage.

摘要

辐射损伤是生物大分子晶体学的一个主要限制因素,即使对于冷冻样品也是如此,在微衍射中尤为突出。对于在同步加速器源处最常用于蛋白质晶体学的 X 射线能量,光电子是辐射损伤的主要来源。如果光束尺寸相对于光电子路径长度较小,则光电子可能会逃离光束足迹,从而使被照亮的体积中的损伤减少。因此,可能可以利用这种现象来减少在使用 X 射线探测结晶和非结晶生物样品的衍射、光谱和成像等技术的数据测量期间的辐射诱导损伤。在对小光束的蛋白质晶体中减少辐射损伤的系统和直接实验证明中,随着微尺寸 X 射线光束尺寸的减小,对损伤进行了测量。归一化为剂量的损伤率从最大光束(15.6μm)降低到最小光束(0.84μm)降低了三分之一。还平行于入射的 1μm X 射线束的偏振方向以及垂直于入射的 1μm X 射线束的偏振方向对蛋白质晶体的辐射损伤进行了映射。在光束中心处的损伤最大,并且在距离约 4μm 处单调下降至零,确定了光电子的范围。观察到的损伤比光电子发射概率的各向异性小,与光电子轨迹模拟一致。这些实验结果为使用微米尺寸的 X 射线束减轻辐射损伤的影响的数据收集协议提供了依据。

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