Austrian Academy of Sciences, Institute for Limnology, 5310-Mondsee, Austria.
BMC Evol Biol. 2011 Apr 7;11:90. doi: 10.1186/1471-2148-11-90.
Studies on genome size variation in animals are rarely done at lower taxonomic levels, e.g., slightly above/below the species level. Yet, such variation might provide important clues on the tempo and mode of genome size evolution. In this study we used the flow-cytometry method to study the evolution of genome size in the rotifer Brachionus plicatilis, a cryptic species complex consisting of at least 14 closely related species.
We found an unexpectedly high variation in this species complex, with genome sizes ranging approximately seven-fold (haploid '1C' genome sizes: 0.056-0.416 pg). Most of this variation (67%) could be ascribed to the major clades of the species complex, i.e. clades that are well separated according to most species definitions. However, we also found substantial variation (32%) at lower taxonomic levels--within and among genealogical species--and, interestingly, among species pairs that are not completely reproductively isolated. In one genealogical species, called B. 'Austria', we found greatly enlarged genome sizes that could roughly be approximated as multiples of the genomes of its closest relatives, which suggests that whole-genome duplications have occurred early during separation of this lineage. Overall, genome size was significantly correlated to egg size and body size, even though the latter became non-significant after controlling for phylogenetic non-independence.
Our study suggests that substantial genome size variation can build up early during speciation, potentially even among isolated populations. An alternative, but not mutually exclusive interpretation might be that reproductive isolation tends to build up unusually slow in this species complex.
在动物中,对基因组大小变化的研究很少在较低的分类学水平上进行,例如在物种水平之上或之下。然而,这种变化可能为基因组大小进化的速度和模式提供重要线索。在这项研究中,我们使用流式细胞术方法研究了轮虫褶皱臂尾轮虫的基因组大小进化,这是一个由至少 14 个密切相关的物种组成的隐种复合体。
我们发现这个种复合体的基因组大小变化出人意料地大,范围大约是七倍(单倍体“1C”基因组大小:0.056-0.416 pg)。这种变化的大部分(67%)可以归因于该种复合体的主要分支,即根据大多数物种定义很好分离的分支。然而,我们也发现了在较低分类学水平上的大量变化(32%),包括在种内和种间,而且有趣的是,在不完全生殖隔离的种对之间也存在这种变化。在一个叫做 B. 'Austria' 的种中,我们发现了大大增大的基因组大小,可以大致近似为其最接近的亲缘基因组的倍数,这表明全基因组复制在这个谱系的早期就发生了。总的来说,基因组大小与卵大小和身体大小显著相关,尽管在控制了系统发育非独立性后,后者变得不显著。
我们的研究表明,在物种形成的早期,大量的基因组大小变化就可以积累,甚至可能在隔离的种群中也可以积累。另一种解释,虽然不是相互排斥的,可能是在这个种复合体中生殖隔离的建立倾向于非常缓慢。