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基因组大小与物种多样化

Genome Size and Species Diversification.

作者信息

Kraaijeveld Ken

出版信息

Evol Biol. 2010 Dec;37(4):227-233. doi: 10.1007/s11692-010-9093-4. Epub 2010 Sep 17.

DOI:10.1007/s11692-010-9093-4
PMID:22140283
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3227167/
Abstract

Theoretically, there are reasons to believe that large genome size should favour speciation. Several major factors contributing to genome size, such as duplications and transposable element activity have been proposed to facilitate the formation of new species. However, it is also possible that small genome size promotes speciation. For example, selection for genome reduction may be resolved in different ways in incipient species, leading to incompatibilities. Mutations and chromosomal rearrangements may also be more stably inherited in smaller genomes. Here I review the following lines of empirical evidence bearing on this question: (i) Correlations between genome size and species richness of taxa are often negative. (ii) Fossil evidence in lungfish shows that the accumulation of DNA in the genomes of this group coincided with a reduction in species diversity. (iii) Estimates of speciation interval in mammals correlate positively with genome size. (iv) Genome reductions are inferred at the base of particular species radiations and genome expansions at the base of others. (v) Insect clades that have been increasing in diversity up to the present have smaller genomes than clades that have remained stable or have decreased in diversity. The general pattern emerging from these observations is that higher diversification rates are generally found in small-genome taxa. Since diversification rates are the net effect of speciation and extinction, large genomes may thus either constrain speciation rate, increase extinction rate, or both. I argue that some of the cited examples are unlikely to be explained by extinction alone.

摘要

从理论上讲,有理由相信较大的基因组大小应有利于物种形成。有人提出,导致基因组大小变化的几个主要因素,如基因重复和转座元件活性,有助于新物种的形成。然而,小基因组大小也可能促进物种形成。例如,对基因组缩减的选择在初始物种中可能以不同方式得到解决,从而导致不相容性。突变和染色体重排在较小的基因组中也可能更稳定地遗传。在此,我综述以下几方面与此问题相关的经验证据:(i)分类单元的基因组大小与物种丰富度之间的相关性通常为负。(ii)肺鱼的化石证据表明,该类群基因组中DNA的积累与物种多样性的减少同时发生。(iii)哺乳动物物种形成间隔的估计与基因组大小呈正相关。(iv)在特定物种辐射的基部推断出基因组缩减,而在其他物种辐射的基部推断出基因组扩张。(v)直到现在多样性一直在增加的昆虫类群的基因组比那些保持稳定或多样性减少的类群的基因组小。从这些观察中得出的总体模式是,在小基因组分类单元中通常发现较高的多样化率。由于多样化率是物种形成和灭绝的净效应,因此大基因组可能要么限制物种形成率,要么增加灭绝率,或者两者兼而有之。我认为,所引用的一些例子不太可能仅用灭绝来解释。

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