• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

新型逃逸突变体表明,TRIM5α 的结合位点广泛分布于整个鼠白血病病毒衣壳蛋白的外表面。

Novel escape mutants suggest an extensive TRIM5α binding site spanning the entire outer surface of the murine leukemia virus capsid protein.

机构信息

Division of Virology, MRC National Institute for Medical Research, London, United Kingdom.

出版信息

PLoS Pathog. 2011 Mar;7(3):e1002011. doi: 10.1371/journal.ppat.1002011. Epub 2011 Mar 31.

DOI:10.1371/journal.ppat.1002011
PMID:21483490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3068999/
Abstract

After entry into target cells, retroviruses encounter the host restriction factors such as Fv1 and TRIM5α. While it is clear that these factors target retrovirus capsid proteins (CA), recognition remains poorly defined in the absence of structural information. To better understand the binding interaction between TRIM5α and CA, we selected a panel of novel N-tropic murine leukaemia virus (N-MLV) escape mutants by a serial passage of replication competent N-MLV in rhesus macaque TRIM5α (rhTRIM5α)-positive cells using a small percentage of unrestricted cells to allow multiple rounds of virus replication. The newly identified mutations, many of which involve changes in charge, are distributed over the outer 'top' surface of N-MLV CA, including the N-terminal β-hairpin, and map up to 29 A(o) apart. Biological characterisation with a number of restriction factors revealed that only one of the new mutations affects restriction by human TRIM5α, indicating significant differences in the binding interaction between N-MLV and the two TRIM5αs, whereas three of the mutations result in dual sensitivity to Fv1(n) and Fv1(b). Structural studies of two mutants show that no major changes in the overall CA conformation are associated with escape from restriction. We conclude that interactions involving much, if not all, of the surface of CA are vital for TRIM5α binding.

摘要

逆转录病毒进入靶细胞后,会遇到 Fv1 和 TRIM5α 等宿主限制因子。虽然很明显这些因子针对的是逆转录病毒衣壳蛋白(CA),但在缺乏结构信息的情况下,其识别仍未得到明确界定。为了更好地理解 TRIM5α 和 CA 之间的结合相互作用,我们通过在恒河猴 TRIM5α(rhTRIM5α)阳性细胞中用小比例未受限制的细胞进行复制有效的 N-MLV 的连续传代,选择了一组新型 N 嗜性鼠白血病病毒(N-MLV)逃逸突变体。允许多轮病毒复制。新鉴定的突变,其中许多涉及电荷变化,分布在 N-MLV CA 的外“顶”表面上,包括 N 端 β-发夹,并映射高达 29Å 。用多种限制因子进行的生物学特征分析表明,只有一个新突变会影响人 TRIM5α 的限制,表明 N-MLV 和两种 TRIM5α 之间的结合相互作用存在显著差异,而三个突变导致对 Fv1(n) 和 Fv1(b) 的双重敏感性。对两个突变体的结构研究表明,从限制中逃逸出来与 CA 整体构象没有重大变化有关。我们得出的结论是,涉及 CA 表面的大部分(如果不是全部)的相互作用对于 TRIM5α 结合至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/c5374e37b2ed/ppat.1002011.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/1d99492665d6/ppat.1002011.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/db79b14c89b9/ppat.1002011.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/79a3a65fb0f5/ppat.1002011.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/08516d6e7dda/ppat.1002011.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/0d24b2d9bf2c/ppat.1002011.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/9ab465ea76a9/ppat.1002011.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/c5374e37b2ed/ppat.1002011.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/1d99492665d6/ppat.1002011.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/db79b14c89b9/ppat.1002011.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/79a3a65fb0f5/ppat.1002011.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/08516d6e7dda/ppat.1002011.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/0d24b2d9bf2c/ppat.1002011.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/9ab465ea76a9/ppat.1002011.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6c5/3068999/c5374e37b2ed/ppat.1002011.g007.jpg

相似文献

1
Novel escape mutants suggest an extensive TRIM5α binding site spanning the entire outer surface of the murine leukemia virus capsid protein.新型逃逸突变体表明,TRIM5α 的结合位点广泛分布于整个鼠白血病病毒衣壳蛋白的外表面。
PLoS Pathog. 2011 Mar;7(3):e1002011. doi: 10.1371/journal.ppat.1002011. Epub 2011 Mar 31.
2
A comparison of murine leukemia viruses that escape from human and rhesus macaque TRIM5αs.逃过人及恒河猴 TRIM5α 的鼠白血病病毒的比较。
J Virol. 2013 Jun;87(11):6455-68. doi: 10.1128/JVI.03425-12. Epub 2013 Mar 27.
3
Complex determinants within the Moloney murine leukemia virus capsid modulate susceptibility of the virus to Fv1 and Ref1-mediated restriction.莫洛尼鼠白血病病毒衣壳内的复杂决定因素调节病毒对Fv1和Ref1介导的限制的敏感性。
Virology. 2007 Jul 5;363(2):245-55. doi: 10.1016/j.virol.2006.09.048. Epub 2007 Mar 6.
4
A novel envelope mediated post entry restriction of murine leukaemia virus in human cells is Ref1/TRIM5α independent.一种新型的包膜介导的人细胞内鼠白血病病毒进入后限制作用与 Ref1/TRIM5α 无关。
Retrovirology. 2010 Oct 7;7:81. doi: 10.1186/1742-4690-7-81.
5
The human TRIM5alpha restriction factor mediates accelerated uncoating of the N-tropic murine leukemia virus capsid.人类TRIM5α限制因子介导N型嗜亲性鼠白血病病毒衣壳的脱壳加速。
J Virol. 2007 Mar;81(5):2138-48. doi: 10.1128/JVI.02318-06. Epub 2006 Nov 29.
6
Trim5alpha protein restricts both HIV-1 and murine leukemia virus.Trim5α蛋白可限制HIV-1和鼠白血病病毒。
Proc Natl Acad Sci U S A. 2004 Jul 20;101(29):10786-91. doi: 10.1073/pnas.0402876101. Epub 2004 Jul 12.
7
An invariant surface patch on the TRIM5alpha PRYSPRY domain is required for retroviral restriction but dispensable for capsid binding.TRIM5α PRYSPRY结构域上的一个不变表面斑块是逆转录病毒限制所必需的,但对于衣壳结合是可有可无的。
J Virol. 2009 Apr;83(7):3365-73. doi: 10.1128/JVI.00432-08. Epub 2009 Jan 19.
8
General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.TRIM5蛋白识别逆转录病毒衣壳模式的通用模型。
J Virol. 2018 Jan 30;92(4). doi: 10.1128/JVI.01563-17. Print 2018 Feb 15.
9
Expression levels of Fv1: effects on retroviral restriction specificities.Fv1的表达水平:对逆转录病毒限制特异性的影响
Retrovirology. 2016 Jun 24;13(1):42. doi: 10.1186/s12977-016-0276-7.
10
Rhesus TRIM5α disrupts the HIV-1 capsid at the inter-hexamer interfaces.恒河猴 TRIM5α 在 HIV-1 衣壳的六聚体界面处破坏衣壳。
PLoS Pathog. 2011 Mar;7(3):e1002009. doi: 10.1371/journal.ppat.1002009. Epub 2011 Mar 24.

引用本文的文献

1
Characterization of Megabat-Favored, CA-Dependent Susceptibility to Retrovirus Infection.描述以大蝙蝠为偏好宿主、CA 依赖性的易感性对逆转录病毒感染的影响。
J Virol. 2023 Mar 30;97(3):e0180322. doi: 10.1128/jvi.01803-22. Epub 2023 Feb 13.
2
Mapping of molecular interactions between human E3 ligase TRIM69 and Dengue virus NS3 protease using hydrogen-deuterium exchange mass spectrometry.利用氘氢交换质谱技术绘制人 E3 连接酶 TRIM69 与登革热病毒 NS3 蛋白酶之间的分子相互作用图谱。
Cell Mol Life Sci. 2022 Apr 10;79(5):233. doi: 10.1007/s00018-022-04245-x.
3
HIV-1 capsid variability: viral exploitation and evasion of capsid-binding molecules.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Adaptation of HIV-1 to cells expressing rhesus monkey TRIM5α.HIV-1 对表达恒河猴 TRIM5α 的细胞的适应。
Virology. 2010 Dec 20;408(2):204-12. doi: 10.1016/j.virol.2010.09.019. Epub 2010 Oct 16.
3
Structural and functional analysis of prehistoric lentiviruses uncovers an ancient molecular interface.史前慢病毒的结构与功能分析揭示了古老的分子界面。
HIV-1 衣壳变异性:病毒对衣壳结合分子的利用和逃逸。
Retrovirology. 2021 Oct 26;18(1):32. doi: 10.1186/s12977-021-00577-x.
4
Hierarchical assembly governs TRIM5α recognition of HIV-1 and retroviral capsids.分层组装控制 TRIM5α 对 HIV-1 和逆转录病毒衣壳的识别。
Sci Adv. 2019 Nov 27;5(11):eaaw3631. doi: 10.1126/sciadv.aaw3631. eCollection 2019 Nov.
5
Restriction of HIV-1 and other retroviruses by TRIM5.TRIM5 限制 HIV-1 和其他逆转录病毒。
Nat Rev Microbiol. 2019 Sep;17(9):546-556. doi: 10.1038/s41579-019-0225-2. Epub 2019 Jul 16.
6
Dynamic regulation of HIV-1 capsid interaction with the restriction factor TRIM5α identified by magic-angle spinning NMR and molecular dynamics simulations.通过魔角旋转 NMR 和分子动力学模拟鉴定 HIV-1 衣壳与限制因子 TRIM5α相互作用的动态调控。
Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11519-11524. doi: 10.1073/pnas.1800796115. Epub 2018 Oct 17.
7
General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.TRIM5蛋白识别逆转录病毒衣壳模式的通用模型。
J Virol. 2018 Jan 30;92(4). doi: 10.1128/JVI.01563-17. Print 2018 Feb 15.
8
Structure of a Spumaretrovirus Gag Central Domain Reveals an Ancient Retroviral Capsid.泡沫逆转录病毒Gag中央结构域的结构揭示了一种古老的逆转录病毒衣壳。
PLoS Pathog. 2016 Nov 9;12(11):e1005981. doi: 10.1371/journal.ppat.1005981. eCollection 2016 Nov.
9
Contributions of Charged Residues in Structurally Dynamic Capsid Surface Loops to Rous Sarcoma Virus Assembly.结构动态衣壳表面环中带电残基对劳氏肉瘤病毒组装的贡献。
J Virol. 2016 May 27;90(12):5700-5714. doi: 10.1128/JVI.00378-16. Print 2016 Jun 15.
10
Tracking interspecies transmission and long-term evolution of an ancient retrovirus using the genomes of modern mammals.利用现代哺乳动物基因组追踪一种古老逆转录病毒的种间传播和长期进化。
Elife. 2016 Mar 8;5:e12704. doi: 10.7554/eLife.12704.
Cell Host Microbe. 2010 Sep 16;8(3):248-59. doi: 10.1016/j.chom.2010.08.006.
4
Multiple sites in the N-terminal half of simian immunodeficiency virus capsid protein contribute to evasion from rhesus monkey TRIM5α-mediated restriction.灵长类免疫缺陷病毒衣壳蛋白 N 端半段的多个位点有助于逃避恒河猴 TRIM5α 介导的限制。
Retrovirology. 2010 Sep 8;7:72. doi: 10.1186/1742-4690-7-72.
5
A single amino acid substitution of the human immunodeficiency virus type 1 capsid protein affects viral sensitivity to TRIM5 alpha.人类免疫缺陷病毒 1 型衣壳蛋白的单个氨基酸取代会影响病毒对 TRIM5α 的敏感性。
Retrovirology. 2010 Jul 7;7:58. doi: 10.1186/1742-4690-7-58.
6
The specificity of TRIM5 alpha-mediated restriction is influenced by its coiled-coil domain.TRIM5α 介导的限制的特异性受其卷曲螺旋结构域的影响。
J Virol. 2010 Jun;84(11):5790-801. doi: 10.1128/JVI.02413-09. Epub 2010 Mar 10.
7
Crystal structure of PRY-SPRY domain of human TRIM72.人类TRIM72的PRY-SPRY结构域的晶体结构
Proteins. 2010 Feb 15;78(3):790-5. doi: 10.1002/prot.22647.
8
A B-box 2 surface patch important for TRIM5alpha self-association, capsid binding avidity, and retrovirus restriction.一个对TRIM5α自我缔合、衣壳结合亲和力和逆转录病毒限制很重要的B盒2表面区域。
J Virol. 2009 Oct;83(20):10737-51. doi: 10.1128/JVI.01307-09. Epub 2009 Aug 5.
9
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
10
Structure of the capsid amino-terminal domain from the betaretrovirus, Jaagsiekte sheep retrovirus.β逆转录病毒——绵羊肺腺瘤逆转录病毒衣壳氨基末端结构域的结构
J Mol Biol. 2009 Mar 6;386(4):1179-92. doi: 10.1016/j.jmb.2008.10.066. Epub 2008 Nov 5.