Keck Graduate Institute of Applied Life Sciences, 535 Watson Drive, Claremont, California 91711, USA.
J Clin Microbiol. 2011 Jul;49(7):2533-9. doi: 10.1128/JCM.02171-10. Epub 2011 May 4.
Molecular detection of microorganisms requires microbial cell disruption to release nucleic acids. Sensitive detection of thick-walled microorganisms such as Bacillus spores and Mycobacterium cells typically necessitates mechanical disruption through bead beating or sonication, using benchtop instruments that require line power. Miniaturized, low-power, battery-operated devices are needed to facilitate mechanical pathogen disruption for nucleic acid testing at the point of care and in field settings. We assessed the lysis efficiency of a very small disposable bead blender called OmniLyse relative to the industry standard benchtop Biospec Mini-BeadBeater. The OmniLyse weighs approximately 3 g, at a size of approximately 1.1 cm(3) without the battery pack. Both instruments were used to mechanically lyse Bacillus subtilis spores and Mycobacterium bovis BCG cells. The relative lysis efficiency was assessed through real-time PCR. Cycle threshold (C(T)) values obtained at all microbial cell concentrations were similar between the two devices, indicating that the lysis efficiencies of the OmniLyse and the BioSpec Mini-BeadBeater were comparable. As an internal control, genomic DNA from a different organism was spiked at a constant concentration into each sample upstream of lysis. The C(T) values for PCR amplification of lysed samples using primers specific to this internal control were comparable between the two devices, indicating negligible PCR inhibition or other secondary effects. Overall, the OmniLyse device was found to effectively lyse tough-walled organisms in a very small, disposable, battery-operated format, which is expected to facilitate sensitive point-of-care nucleic acid testing.
微生物的分子检测需要破坏微生物细胞以释放核酸。通常需要通过珠磨或超声处理等机械破坏来检测厚壁微生物,如芽孢杆菌孢子和分枝杆菌细胞,这些方法需要使用台式仪器,并需要电源。需要小型化、低功率、电池供电的设备来促进机械病原体破坏,以便在护理点和现场环境中进行核酸检测。我们评估了一种名为 OmniLyse 的非常小的一次性珠式混合器相对于行业标准台式 Biospec Mini-BeadBeater 的裂解效率。OmniLyse 不包括电池组时重约 3 克,尺寸约为 1.1 立方厘米。两种仪器均用于机械裂解枯草芽孢杆菌孢子和牛分枝杆菌 BCG 细胞。通过实时 PCR 评估相对裂解效率。两种设备在所有微生物细胞浓度下获得的循环阈值 (C(T)) 值相似,表明 OmniLyse 和 BioSpec Mini-BeadBeater 的裂解效率相当。作为内部对照,在裂解前将来自不同生物体的基因组 DNA 以恒定浓度掺入每个样品中。使用针对该内部对照的引物对裂解样品进行 PCR 扩增的 C(T) 值在两种设备之间相当,表明几乎没有 PCR 抑制或其他次要影响。总体而言,OmniLyse 设备被发现能够以非常小的一次性电池供电格式有效地裂解坚韧的生物体,这有望促进敏感的护理点核酸检测。