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局部钙事件中的信号质量和 Ca²⁺动力学:建模研究。

Signal mass and Ca²⁺ kinetics in local calcium events: a modeling study.

机构信息

Department of Biophysics, "Carol Davila" University of Medicine and Pharmacy, 8 Eroii Sanitari, 050474 Bucharest, Romania.

出版信息

J Mol Model. 2012 Feb;18(2):721-36. doi: 10.1007/s00894-011-1104-6. Epub 2011 May 12.

Abstract

We use a detailed modeling formalism based on numerical simulations of local calcium release events where the blurring of the image, the presence of diffusional barriers provided by large organelles situated close to the release site, as well as the variable position of the scan line with respect to the release site are taken into consideration. We have investigated the effect of the fluorescence noise fluctuations on the accuracy in computing the signal mass from linescan recordings and obtained a quantitative description of both the signal mass and the local increase in the free Ca(2+) level as a function of the release current, the release duration and the orientation of the scan line, for three different levels of noise magnitudes. The model could provide a very good fit to a wide set of available experimental data regarding the signal mass of puffs visualized by fluorescence microscopy in the Xenopus oocyte loaded with 40 μM Oregon Green-1 in the absence of the calcium chelator EGTA. Numerical simulations also predict the amplitude and the kinetics of calcium signals evolving in the absence of the indicator, and indicate that sub-maximal activation of IP(3) receptors could produce in average levels of about 2 μM and 0.4 μM free Ca(2+) close to a release site located in the animal or in the vegetal hemisphere, respectively, whereas the maximal levels reached in more rare events could be 11 μM and 4 μM, respectively.

摘要

我们使用一种基于局部钙释放事件数值模拟的详细建模形式,其中考虑了图像模糊、由靠近释放位点的大细胞器提供的扩散屏障的存在,以及扫描线相对于释放位点的位置变化。我们研究了荧光噪声波动对从线扫描记录中计算信号质量的准确性的影响,并获得了信号质量和局部游离 Ca(2+)水平增加的定量描述,作为释放电流、释放持续时间和扫描线取向的函数,对于三种不同的噪声幅度水平。该模型可以很好地拟合关于在没有钙螯合剂 EGTA 的情况下,用荧光显微镜观察到的卵母细胞中用 40 μM Oregon Green-1 加载的 Xenopus oocyte 中 puff 的信号质量的广泛实验数据。数值模拟还预测了在没有指示剂的情况下钙信号的幅度和动力学,并表明 IP(3)受体的亚最大激活可以在距位于动物或植物半球的释放位点约 2 μM 和 0.4 μM 的游离 Ca(2+)的平均水平,而在更罕见的事件中达到的最大水平分别为 11 μM 和 4 μM。

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