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核孔复合物中 mRNA 输出过程中的 Dbp5 循环 I:dbp5 突变体在 RNA 结合和 ATP 水解方面存在缺陷,这为 Nup159 和 Gle1 定义了关键步骤。

The Dbp5 cycle at the nuclear pore complex during mRNA export I: dbp5 mutants with defects in RNA binding and ATP hydrolysis define key steps for Nup159 and Gle1.

机构信息

Department of Biochemistry, Dartmouth Medical School, Hanover, New Hampshire 03755, USA.

出版信息

Genes Dev. 2011 May 15;25(10):1052-64. doi: 10.1101/gad.2041611.

Abstract

Nuclear export of messenger RNA (mRNA) occurs by translocation of mRNA/protein complexes (mRNPs) through nuclear pore complexes (NPCs). The DEAD-box protein Dbp5 mediates export by triggering removal of mRNP proteins in a spatially controlled manner. This requires Dbp5 interaction with Nup159 in NPC cytoplasmic filaments and activation of Dbp5's ATPase activity by Gle1 bound to inositol hexakisphosphate (IP(6)). However, the precise sequence of events within this mechanism has not been fully defined. Here we analyze dbp5 mutants that alter ATP binding, ATP hydrolysis, or RNA binding. We found that ATP binding and hydrolysis are required for efficient Dbp5 association with NPCs. Interestingly, mutants defective for RNA binding are dominant-negative (DN) for mRNA export in yeast and human cells. We show that the DN phenotype stems from competition with wild-type Dbp5 for Gle1 at NPCs. The Dbp5-Gle1 interaction is limiting for export and, importantly, can be independent of Nup159. Fluorescence recovery after photobleaching experiments in yeast show a very dynamic association between Dbp5 and NPCs, averaging <1 sec, similar to reported NPC translocation rates for mRNPs. This work reveals critical steps in the Gle1-IP(6)/Dbp5/Nup159 cycle, and suggests that the number of remodeling events mediated by a single Dbp5 is limited.

摘要

信使 RNA(mRNA)的核输出是通过 mRNA/蛋白质复合物(mRNP)穿过核孔复合物(NPC)的易位来实现的。DEAD -box 蛋白 Dbp5 通过以空间控制的方式触发 mRNP 蛋白的去除来介导输出。这需要 Dbp5 与 NPC 细胞质丝中的 Nup159 相互作用,以及与肌醇六磷酸(IP(6))结合的 Gle1 激活 Dbp5 的 ATP 酶活性。然而,该机制中的确切事件顺序尚未完全定义。在这里,我们分析了改变 ATP 结合、ATP 水解或 RNA 结合的 dbp5 突变体。我们发现,ATP 结合和水解对于 Dbp5 与 NPC 有效结合是必需的。有趣的是,对于 RNA 结合缺陷的突变体在酵母和人类细胞中是 mRNA 输出的显性负(DN)。我们表明,DN 表型源于与 NPC 上的野生型 Dbp5 竞争 Gle1。Dbp5-Gle1 相互作用对输出是有限的,重要的是,它可以独立于 Nup159。酵母中的光漂白后荧光恢复实验显示 Dbp5 与 NPC 之间存在非常动态的关联,平均 <1 秒,类似于报道的 mRNP 的 NPC 易位率。这项工作揭示了 Gle1-IP(6)/Dbp5/Nup159 循环中的关键步骤,并表明单个 Dbp5 介导的重塑事件的数量是有限的。

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