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鉴定夏威夷特有灌木 Schiedea adamantis(石竹科)中的微卫星位点,并在相关物种和属中进行扩增。

Characterization of microsatellite loci in the Hawaiian endemic shrub Schiedea adamantis (Caryophyllaceae) and amplification in related species and genera.

机构信息

Department of Biological Sciences, University of Cincinnati, Cincinnati, OH 45221-0006, USA, Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA 92697, USA.

出版信息

Mol Ecol Resour. 2008 Sep;8(5):1081-4. doi: 10.1111/j.1755-0998.2008.02161.x. Epub 2008 Jun 28.

Abstract

Schiedea adamantis is a rare, perennial shrub endemic to the Hawaiian island of Oahu where it consists of a single population. Using a nonradioactive protocol, 12 microsatellite primers were developed that consisted of di-, tri-, penta- and hexanucleotide repeats. Using multiplexed reactions, all but two primers exhibited polymorphism with an average of 3.67 alleles per primer. Most primers also amplified in 28 additional Schiedea species, revealing wide applicability across the genus; eight and nine primers also amplified in Honckenya peploides and Silene lanceolata, respectively, related genera in the Caryophyllaceae. This is the first known report of microsatellite primers developed in Schiedea.

摘要

亚当氏岩白菜是一种罕见的、多年生的灌木,原产于夏威夷的瓦胡岛,那里只有一个种群。使用非放射性方案,开发了 12 个微卫星引物,由二、三、五和六核苷酸重复组成。使用多重反应,除了两个引物外,所有引物都表现出多态性,每个引物平均有 3.67 个等位基因。大多数引物也能在 28 种其他岩白菜属物种中扩增,这表明它们在属内具有广泛的适用性;8 个和 9 个引物也分别在 related genera in the Caryophyllaceae 的 Honckenya peploides 和 Silene lanceolata 中扩增。这是首次在岩白菜属中开发微卫星引物的报道。

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