Section of Biomedical Image Analysis, Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Neuroimage. 2011 Aug 1;57(3):918-27. doi: 10.1016/j.neuroimage.2011.05.023. Epub 2011 May 14.
This paper presents a paradigm for generating a quantifiable marker of pathology that supports diagnosis and provides a potential biomarker of neuropsychiatric disorders, such as autism spectrum disorder (ASD). This is achieved by creating high-dimensional nonlinear pattern classifiers using support vector machines (SVM), that learn the underlying pattern of pathology using numerous atlas-based regional features extracted from diffusion tensor imaging (DTI) data. These classifiers, in addition to providing insight into the group separation between patients and controls, are applicable on a single subject basis and have the potential to aid in diagnosis by assigning a probabilistic abnormality score to each subject that quantifies the degree of pathology and can be used in combination with other clinical scores to aid in diagnostic decision. They also produce a ranking of regions that contribute most to the group classification and separation, thereby providing a neurobiological insight into the pathology. As an illustrative application of the general framework for creating diffusion based abnormality classifiers we create classifiers for a dataset consisting of 45 children with ASD (mean age 10.5 ± 2.5 yr) as compared to 30 typically developing (TD) controls (mean age 10.3 ± 2.5 yr). Based on the abnormality scores, a distinction between the ASD population and TD controls was achieved with 80% leave one out (LOO) cross-validation accuracy with high significance of p<0.001, ~84% specificity and ~74% sensitivity. Regions that contributed to this abnormality score involved fractional anisotropy (FA) differences mainly in right occipital regions as well as in left superior longitudinal fasciculus, external and internal capsule while mean diffusivity (MD) discriminates were observed primarily in right occipital gyrus and right temporal white matter.
本文提出了一种生成病理学可量化标志物的范例,该标志物支持诊断,并为神经精神障碍(如自闭症谱系障碍(ASD))提供了潜在的生物标志物。这是通过使用支持向量机(SVM)创建高维非线性模式分类器来实现的,该分类器使用从弥散张量成像(DTI)数据中提取的基于图谱的众多区域特征来学习病理学的潜在模式。除了提供患者和对照组之间分组分离的深入了解外,这些分类器还可以在单个主题的基础上应用,并且有可能通过为每个主题分配概率异常评分来帮助诊断,该评分量化了病理学的程度,可以与其他临床评分结合使用,以帮助诊断决策。它们还会对导致组分类和分离的区域进行排名,从而为病理学提供神经生物学见解。作为创建基于弥散的异常分类器的通用框架的说明性应用,我们为一个由 45 名 ASD 儿童(平均年龄 10.5 ± 2.5 岁)组成的数据集和 30 名典型发育(TD)对照组(平均年龄 10.3 ± 2.5 岁)创建了分类器。基于异常评分,使用 80%的留一法(LOO)交叉验证准确性实现了 ASD 人群与 TD 对照组之间的区分,具有高度显著性(p<0.001),特异性约为 84%,敏感性约为 74%。对该异常评分有贡献的区域涉及右枕叶区域以及左额上纵束、外囊和内囊的各向异性分数(FA)差异,而平均弥散度(MD)判别主要观察到右枕叶回和右颞叶白质。