• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

纳米精度跟踪单个粒子和长形纤维。

Tracking single particles and elongated filaments with nanometer precision.

机构信息

B CUBE-Center of Innovation Competence, Technische Universität Dresden, Dresden, Germany.

出版信息

Biophys J. 2011 Jun 8;100(11):2820-8. doi: 10.1016/j.bpj.2011.04.023.

DOI:10.1016/j.bpj.2011.04.023
PMID:21641328
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3117161/
Abstract

Recent developments in image processing have greatly advanced our understanding of biomolecular processes in vitro and in vivo. In particular, using Gaussian models to fit the intensity profiles of nanometer-sized objects have enabled their two-dimensional localization with a precision in the one-nanometer range. Here, we present an algorithm to precisely localize curved filaments whose structures are characterized by subresolution diameters and micrometer lengths. Using surface-immobilized microtubules, fluorescently labeled with rhodamine, we demonstrate positional precisions of ∼2 nm when determining the filament centerline and ∼9 nm when localizing the filament tips. Combined with state-of-the-art single particle tracking we apply the algorithm 1), to motor-proteins stepping on immobilized microtubules, 2), to depolymerizing microtubules, and 3), to microtubules gliding over motor-coated surfaces.

摘要

图像处理的最新进展极大地促进了我们对体外和体内生物分子过程的理解。特别是,使用高斯模型来拟合纳米级物体的强度分布,可以将其二维定位精度提高到纳米级。在这里,我们提出了一种算法,可以精确地定位具有亚分辨率直径和微米长度的弯曲细丝的结构。使用表面固定的微管,用罗丹明标记荧光,我们在确定纤维中心线时的位置精度约为 2nm,在定位纤维尖端时的位置精度约为 9nm。结合最先进的单颗粒跟踪技术,我们将该算法应用于 1)固定在微管上的运动蛋白的步进,2)微管的解聚,3)微管在运动蛋白覆盖的表面上的滑行。

相似文献

1
Tracking single particles and elongated filaments with nanometer precision.纳米精度跟踪单个粒子和长形纤维。
Biophys J. 2011 Jun 8;100(11):2820-8. doi: 10.1016/j.bpj.2011.04.023.
2
Fluorescence imaging of single Kinesin motors on immobilized microtubules.固定微管上单个驱动蛋白分子马达的荧光成像。
Methods Mol Biol. 2011;783:121-37. doi: 10.1007/978-1-61779-282-3_7.
3
Studying kinesin motors by optical 3D-nanometry in gliding motility assays.在滑行运动分析中通过光学三维纳米测量法研究驱动蛋白马达。
Methods Cell Biol. 2010;95:247-71. doi: 10.1016/S0091-679X(10)95014-0.
4
Molecular wear of microtubules propelled by surface-adhered kinesins.表面黏附的驱动蛋白推动微管的分子磨损。
Nat Nanotechnol. 2015 Feb;10(2):166-9. doi: 10.1038/nnano.2014.334. Epub 2015 Jan 26.
5
Impact-Free Measurement of Microtubule Rotations on Kinesin and Cytoplasmic-Dynein Coated Surfaces.在驱动蛋白和细胞质动力蛋白包被表面上对微管旋转进行无影响测量。
PLoS One. 2015 Sep 14;10(9):e0136920. doi: 10.1371/journal.pone.0136920. eCollection 2015.
6
The distance that kinesin-1 holds its cargo from the microtubule surface measured by fluorescence interference contrast microscopy.通过荧光干涉对比显微镜测量驱动蛋白-1将其货物保持在微管表面的距离。
Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15812-7. doi: 10.1073/pnas.0510400103. Epub 2006 Oct 11.
7
Measuring Microtubule Supertwist and Defects by Three-Dimensional-Force-Clamp Tracking of Single Kinesin-1 Motors.通过单驱动蛋白-1 分子的三维力钳跟踪测量微管超螺旋和缺陷。
Nano Lett. 2018 Feb 14;18(2):1290-1295. doi: 10.1021/acs.nanolett.7b04971. Epub 2018 Feb 5.
8
Competition between kinesin-1 and myosin-V defines posterior determination.驱动蛋白-1 和肌球蛋白-V 之间的竞争决定了后部的形成。
Elife. 2020 Feb 14;9:e54216. doi: 10.7554/eLife.54216.
9
Measuring microtubule persistence length using a microtubule gliding assay.使用微管滑动试验测量微管持久长度。
Methods Cell Biol. 2013;115:13-25. doi: 10.1016/B978-0-12-407757-7.00002-5.
10
Measuring the number and spacing of molecular motors propelling a gliding microtubule.测量推动滑行微管的分子马达的数量和间距。
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jan;83(1 Pt 1):011918. doi: 10.1103/PhysRevE.83.011918. Epub 2011 Jan 28.

引用本文的文献

1
Cellular optical imaging techniques: a dynamic advancing frontier.细胞光学成像技术:一个动态发展的前沿领域。
Sci China Life Sci. 2025 Jul 16. doi: 10.1007/s11427-024-2916-5.
2
Ciliary beating patterns map onto a low-dimensional behavioural space.纤毛跳动模式映射到一个低维行为空间。
Nat Phys. 2022 Mar;18(3):332-337. doi: 10.1038/s41567-021-01446-2. Epub 2022 Jan 10.
3
ATLAS: Machine learning-enhanced filament analysis for the In Vitro Motility Assay.ATLAS:用于体外运动分析的机器学习增强型细丝分析
Biophys Rep (N Y). 2025 Jun 21;5(3):100221. doi: 10.1016/j.bpr.2025.100221.
4
Delivery of intraflagellar transport proteins to the ciliary base and assembly into trains.将鞭毛内运输蛋白运输至纤毛基部并组装成列。
Sci Adv. 2025 Apr 4;11(14):eadr1716. doi: 10.1126/sciadv.adr1716.
5
Barcoding Microtubules: Encoding Information onto Macromolecules by Photobleaching.微管条形码:通过光漂白将信息编码到大分子上
Nano Lett. 2025 Apr 2;25(13):5283-5290. doi: 10.1021/acs.nanolett.5c00105. Epub 2025 Mar 21.
6
DYF-5 regulates intraflagellar transport by affecting train turnaround.DYF-5通过影响列车折返来调节鞭毛内运输。
Mol Biol Cell. 2025 May 1;36(5):ar53. doi: 10.1091/mbc.E24-08-0378. Epub 2025 Mar 12.
7
Hydrolysis-deficient mosaic microtubules as faithful mimics of the GTP cap.水解缺陷型镶嵌微管作为GTP帽的忠实模拟物。
Nat Commun. 2025 Mar 10;16(1):2396. doi: 10.1038/s41467-025-57555-6.
8
NuMA is a mitotic adaptor protein that activates dynein and connects it to microtubule minus ends.核有丝分裂装置蛋白是一种有丝分裂衔接蛋白,可激活动力蛋白并将其连接到微管负端。
J Cell Biol. 2025 Apr 7;224(4). doi: 10.1083/jcb.202408118. Epub 2025 Feb 11.
9
Multicolor Tracking of Molecular Motors at Nanometer Resolution.纳米分辨率下分子马达的多色追踪
Methods Mol Biol. 2025;2881:133-144. doi: 10.1007/978-1-0716-4280-1_6.
10
DNA tensiometer reveals catch-bond detachment kinetics of kinesin-1, -2 and -3.DNA张力计揭示驱动蛋白-1、-2和-3的捕获键解离动力学。
bioRxiv. 2025 Mar 25:2024.12.03.626575. doi: 10.1101/2024.12.03.626575.

本文引用的文献

1
Microtubule Tip Tracking and Tip Structures at the Nanometer Scale Using Digital Fluorescence Microscopy.使用数字荧光显微镜在纳米尺度上进行微管尖端追踪和尖端结构研究
Cell Mol Bioeng. 2011 Jun;4(2):192-204. doi: 10.1007/s12195-010-0155-6.
2
Studying kinesin motors by optical 3D-nanometry in gliding motility assays.在滑行运动分析中通过光学三维纳米测量法研究驱动蛋白马达。
Methods Cell Biol. 2010;95:247-71. doi: 10.1016/S0091-679X(10)95014-0.
3
Microtubule dynamics reconstituted in vitro and imaged by single-molecule fluorescence microscopy.微管动力学在体外重建并通过单分子荧光显微镜成像。
Methods Cell Biol. 2010;95:221-45. doi: 10.1016/S0091-679X(10)95013-9.
4
Single-molecule stepping and structural dynamics of myosin X.肌球蛋白 X 的单分子步进和结构动力学。
Nat Struct Mol Biol. 2010 Apr;17(4):485-91. doi: 10.1038/nsmb.1785. Epub 2010 Apr 4.
5
AUTOMATED ACTIN FILAMENT SEGMENTATION, TRACKING AND TIP ELONGATION MEASUREMENTS BASED ON OPEN ACTIVE CONTOUR MODELS.基于开放主动轮廓模型的自动肌动蛋白丝分割、追踪及尖端伸长测量
Proc IEEE Int Symp Biomed Imaging. 2009 Jun 28;2009:1302-1305. doi: 10.1109/ISBI.2009.5193303.
6
Superresolution imaging using single-molecule localization.使用单分子定位的超分辨率成像
Annu Rev Phys Chem. 2010;61:345-67. doi: 10.1146/annurev.physchem.012809.103444.
7
Setting up roadblocks for kinesin-1: mechanism for the selective speed control of cargo carrying microtubules.为驱动蛋白-1设置路障:货物运输微管选择性速度控制的机制
Lab Chip. 2008 Sep;8(9):1441-7. doi: 10.1039/b803585g. Epub 2008 Jul 30.
8
Quantum-dot-assisted characterization of microtubule rotations during cargo transport.量子点辅助表征货物运输过程中微管的旋转
Nat Nanotechnol. 2008 Sep;3(9):552-6. doi: 10.1038/nnano.2008.216. Epub 2008 Aug 10.
9
Three-dimensional particle tracking via bifocal imaging.通过双焦点成像进行三维粒子跟踪。
Nano Lett. 2007 Jul;7(7):2043-5. doi: 10.1021/nl0709120. Epub 2007 Jun 21.
10
Detection of fractional steps in cargo movement by the collective operation of kinesin-1 motors.通过驱动蛋白-1 马达的集体运作检测货物移动中的分数步。
Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):10847-52. doi: 10.1073/pnas.0701864104. Epub 2007 Jun 14.