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生物钟的光适应建模:预测稳定授时的反应。

Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.

机构信息

Aihara Complexity Modelling Project, ERATO, Japan Science and Technology Agency, Tokyo, Japan.

出版信息

PLoS One. 2011;6(6):e20880. doi: 10.1371/journal.pone.0020880. Epub 2011 Jun 16.

DOI:10.1371/journal.pone.0020880
PMID:21698191
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3116846/
Abstract

Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression of specific clock genes. This molecular response to light is called light adaptation. Does light adaptation occur in other organisms? Using published experimental data, we first estimated the time course of the up-regulation rate of gene expression by light. Intriguingly, the estimated up-regulation rate was transient during light period in mice as well as Neurospora. Next, we constructed a computational model to consider how light adaptation had an effect on the entrainment of circadian oscillation to 24-h light-dark cycles. We found that cellular oscillations are more likely to be destabilized without light adaption especially when light intensity is very high. From the present results, we predict that the instability of circadian oscillations under 24-h light-dark cycles can be experimentally observed if light adaptation is altered. We conclude that the functional consequence of light adaptation is to increase the adjustability to 24-h light-dark cycles and then adapt to fluctuating environments in nature.

摘要

生物钟的周期接近但通常不同于地球的自转周期。因此,生物的时钟必须进行调整以与昼夜周期同步。调整时钟的主要信号是光。在Neurospora 中,光短暂地上调特定生物钟基因的表达。这种对光的分子响应称为光适应。光适应该现象是否发生在其他生物体中?我们使用已发表的实验数据,首先估计了光上调基因表达的速率的时间过程。有趣的是,在小鼠和 Neurospora 中,光期间估计的上调率是短暂的。接下来,我们构建了一个计算模型来考虑光适应如何影响生物钟振荡到 24 小时光暗循环的同步。我们发现,没有光适应,细胞振荡更有可能失稳,特别是当光强度非常高时。根据目前的结果,我们预测,如果改变光适应,在 24 小时光暗循环下生物钟振荡的不稳定性可以在实验中观察到。我们得出结论,光适应的功能后果是增加对 24 小时光暗循环的可调节性,然后适应自然环境中的波动。

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本文引用的文献

1
Circadian desynchronization.昼夜节律失调。
Interface Focus. 2011 Feb 6;1(1):153-66. doi: 10.1098/rsfs.2010.0002. Epub 2010 Nov 17.
2
Coupling governs entrainment range of circadian clocks.耦合控制着生物钟的驯化范围。
Mol Syst Biol. 2010 Nov 30;6:438. doi: 10.1038/msb.2010.92.
3
Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains.光适应在 Neurospora 通过激活和抑制 LOV 结构域的竞争相互作用。
星形胶质细胞对视交叉上核神经元活动的调节:数学建模的见解。
J Biol Rhythms. 2020 Jun;35(3):287-301. doi: 10.1177/0748730420913672. Epub 2020 Apr 14.
4
The Neurospora photoreceptor VIVID exerts negative and positive control on light sensing to achieve adaptation.秀丽隐杆线虫光感受器 VIVID 对光感应发挥负向和正向调控作用以实现适应。
Mol Syst Biol. 2013 May 28;9:667. doi: 10.1038/msb.2013.24.
Cell. 2010 Sep 3;142(5):762-72. doi: 10.1016/j.cell.2010.08.010.
4
Physical interaction between VIVID and white collar complex regulates photoadaptation in Neurospora.VIVID 和白领复合物之间的物理相互作用调节Neurospora 的光适应。
Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16715-20. doi: 10.1073/pnas.1011190107. Epub 2010 Aug 23.
5
Robustness from flexibility in the fungal circadian clock.真菌生物钟灵活性带来的稳健性。
BMC Syst Biol. 2010 Jun 24;4:88. doi: 10.1186/1752-0509-4-88.
6
How to achieve fast entrainment? The timescale to synchronization.如何实现快速同步?同步的时间尺度。
PLoS One. 2009 Sep 23;4(9):e7057. doi: 10.1371/journal.pone.0007057.
7
Predicting perfect adaptation motifs in reaction kinetic networks.预测反应动力学网络中的完美适应基序。
J Phys Chem B. 2008 Dec 25;112(51):16752-8. doi: 10.1021/jp806818c.
8
Circadian phase resetting in response to light-dark and dark-light transitions.响应明暗和暗明转换的昼夜节律相位重置。
J Biol Rhythms. 2008 Oct;23(5):425-34. doi: 10.1177/0748730408321567.
9
Modeling the circadian clock: from molecular mechanism to physiological disorders.生物钟建模:从分子机制到生理紊乱
Bioessays. 2008 Jun;30(6):590-600. doi: 10.1002/bies.20762.
10
The Per2 negative feedback loop sets the period in the mammalian circadian clock mechanism.Per2负反馈回路设定了哺乳动物生物钟机制中的周期。
PLoS Comput Biol. 2007 Dec;3(12):e242. doi: 10.1371/journal.pcbi.0030242.