• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Application of ChIP-Seq and related techniques to the study of immune function.ChIP-Seq 及其相关技术在免疫功能研究中的应用。
Immunity. 2011 Jun 24;34(6):830-42. doi: 10.1016/j.immuni.2011.06.002.
2
Genome-Wide Identification of Transcription Factor-Binding Sites in Quiescent Adult Neural Stem Cells.成年静止神经干细胞中转录因子结合位点的全基因组鉴定
Methods Mol Biol. 2018;1686:265-286. doi: 10.1007/978-1-4939-7371-2_19.
3
Role of ChIP-seq in the discovery of transcription factor binding sites, differential gene regulation mechanism, epigenetic marks and beyond.染色质免疫沉淀测序(ChIP-seq)在转录因子结合位点发现、差异基因调控机制、表观遗传标记及其他方面的作用。
Cell Cycle. 2014;13(18):2847-52. doi: 10.4161/15384101.2014.949201.
4
Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.通过染色质免疫沉淀(ChIP)和ChIP测序对人类多能干细胞进行全基因组表观遗传分析。
Methods Mol Biol. 2011;767:253-67. doi: 10.1007/978-1-61779-201-4_19.
5
Using ChIP-seq technology to generate high-resolution profiles of histone modifications.使用染色质免疫沉淀测序(ChIP-seq)技术生成组蛋白修饰的高分辨率图谱。
Methods Mol Biol. 2011;791:265-86. doi: 10.1007/978-1-61779-316-5_20.
6
Active promoters give rise to false positive 'Phantom Peaks' in ChIP-seq experiments.在染色质免疫沉淀测序(ChIP-seq)实验中,活跃启动子会导致假阳性的“幻影峰”。
Nucleic Acids Res. 2015 Aug 18;43(14):6959-68. doi: 10.1093/nar/gkv637. Epub 2015 Jun 27.
7
ChIP on chip and ChIP-Seq assays: genome-wide analysis of transcription factor binding and histone modifications.芯片免疫沉淀和染色质免疫沉淀测序分析:转录因子结合与组蛋白修饰的全基因组分析
Methods Mol Biol. 2015;1288:447-72. doi: 10.1007/978-1-4939-2474-5_26.
8
Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.染色质整合标记用于绘制低输入 DNA 结合蛋白和修饰物图谱。
Nat Protoc. 2020 Oct;15(10):3334-3360. doi: 10.1038/s41596-020-0375-8. Epub 2020 Aug 17.
9
Epigenetic analysis: ChIP-chip and ChIP-seq.表观遗传学分析:染色质免疫沉淀芯片技术和染色质免疫沉淀测序技术。
Methods Mol Biol. 2012;802:377-87. doi: 10.1007/978-1-61779-400-1_25.
10
ChIP-seq in studying epigenetic mechanisms of disease and promoting precision medicine: progresses and future directions.染色质免疫沉淀测序技术在疾病表观遗传机制研究及精准医学推进中的进展与未来方向
Epigenomics. 2016 Sep;8(9):1239-58. doi: 10.2217/epi-2016-0053. Epub 2016 Jun 20.

引用本文的文献

1
New genetic and epigenetic insights into the chemokine system: the latest discoveries aiding progression toward precision medicine.新的遗传和表观遗传对趋化因子系统的深入了解:最新发现有助于朝着精准医学迈进。
Cell Mol Immunol. 2023 Jul;20(7):739-776. doi: 10.1038/s41423-023-01032-x. Epub 2023 May 17.
2
Extracellular vesicles produced by the human gut commensal bacterium elicit anti-inflammatory responses from innate immune cells.由人类肠道共生细菌产生的细胞外囊泡引发先天免疫细胞的抗炎反应。
Front Microbiol. 2022 Nov 10;13:1050271. doi: 10.3389/fmicb.2022.1050271. eCollection 2022.
3
Changes Within H3K4me3-Marked Histone Reveal Molecular Background of Neutrophil Functional Plasticity.H3K4me3 标记组蛋白内的变化揭示了中性粒细胞功能可塑性的分子基础。
Front Immunol. 2022 Jun 10;13:906311. doi: 10.3389/fimmu.2022.906311. eCollection 2022.
4
H3K4me3 Histone ChIP-Seq Analysis Reveals Molecular Mechanisms Responsible for Neutrophil Dysfunction in HIV-Infected Individuals.H3K4me3 组蛋白 ChIP-Seq 分析揭示了导致 HIV 感染个体中性粒细胞功能障碍的分子机制。
Front Immunol. 2021 Jul 15;12:682094. doi: 10.3389/fimmu.2021.682094. eCollection 2021.
5
Do Transgenerational Epigenetic Inheritance and Immune System Development Share Common Epigenetic Processes?跨代表观遗传继承与免疫系统发育是否共享共同的表观遗传过程?
J Dev Biol. 2021 May 12;9(2):20. doi: 10.3390/jdb9020020.
6
Systems immunology: Integrating multi-omics data to infer regulatory networks and hidden drivers of immunity.系统免疫学:整合多组学数据以推断免疫调节网络和隐藏驱动因素。
Curr Opin Syst Biol. 2019 Jun;15:19-29. doi: 10.1016/j.coisb.2019.03.003. Epub 2019 Mar 12.
7
Network Approaches for Dissecting the Immune System.剖析免疫系统的网络方法。
iScience. 2020 Aug 21;23(8):101354. doi: 10.1016/j.isci.2020.101354. Epub 2020 Jul 10.
8
Cancer systems immunology.癌症系统免疫学。
Elife. 2020 Jul 13;9:e53839. doi: 10.7554/eLife.53839.
9
A parallelized, automated platform enabling individual or sequential ChIP of histone marks and transcription factors.一个并行化的自动化平台,可实现组蛋白标记和转录因子的单独或顺序染色质免疫沉淀。
Proc Natl Acad Sci U S A. 2020 Jun 16;117(24):13828-13838. doi: 10.1073/pnas.1913261117. Epub 2020 May 27.
10
Peripheral immune-based biomarkers in cancer immunotherapy: can we realize their predictive potential?癌症免疫治疗中的外周免疫相关生物标志物:我们能否实现其预测潜能?
J Immunother Cancer. 2019 Nov 27;7(1):325. doi: 10.1186/s40425-019-0799-2.

本文引用的文献

1
Mammalian genes are transcribed with widely different bursting kinetics.哺乳动物基因的转录具有广泛不同的爆发动力学。
Science. 2011 Apr 22;332(6028):472-4. doi: 10.1126/science.1198817. Epub 2011 Mar 17.
2
Dynamic BRG1 recruitment during T helper differentiation and activation reveals distal regulatory elements.动态 BRG1 募集在辅助性 T 细胞分化和激活过程中揭示了远端调控元件。
Mol Cell Biol. 2011 Apr;31(7):1512-27. doi: 10.1128/MCB.00920-10. Epub 2011 Jan 24.
3
The Polycomb complex PRC2 and its mark in life.多梳抑制复合物 PRC2 及其在生命中的标记。
Nature. 2011 Jan 20;469(7330):343-9. doi: 10.1038/nature09784.
4
Spreading chromatin into chemical biology.将染色质扩散到化学生物学中。
Chembiochem. 2011 Jan 24;12(2):264-79. doi: 10.1002/cbic.201000761. Epub 2011 Jan 11.
5
A unique chromatin signature uncovers early developmental enhancers in humans.一种独特的染色质特征揭示了人类早期发育增强子。
Nature. 2011 Feb 10;470(7333):279-83. doi: 10.1038/nature09692. Epub 2010 Dec 15.
6
Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation.GCN5/PCAF 介导的 H3K9ac 和 CBP/p300 介导的 H3K18/27ac 在核受体转录激活中的不同作用。
EMBO J. 2011 Jan 19;30(2):249-62. doi: 10.1038/emboj.2010.318. Epub 2010 Dec 3.
7
Histone H3K27ac separates active from poised enhancers and predicts developmental state.组蛋白 H3K27ac 将活性增强子与 poised 增强子区分开,并预测发育状态。
Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21931-6. doi: 10.1073/pnas.1016071107. Epub 2010 Nov 24.
8
Bcl-6 and NF-kappaB cistromes mediate opposing regulation of the innate immune response.Bcl-6 和 NF-κB 顺式作用元件介导固有免疫反应的相反调节。
Genes Dev. 2010 Dec 15;24(24):2760-5. doi: 10.1101/gad.1998010. Epub 2010 Nov 24.
9
Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).不同组蛋白标记的结合差异调节多梳抑制复合物 2(PRC2)的活性和特异性。
Proc Natl Acad Sci U S A. 2010 Nov 9;107(45):19266-71. doi: 10.1073/pnas.1008937107. Epub 2010 Oct 25.
10
Quantitative comparison of genome-wide DNA methylation mapping technologies.全基因组 DNA 甲基化图谱技术的定量比较。
Nat Biotechnol. 2010 Oct;28(10):1106-14. doi: 10.1038/nbt.1681. Epub 2010 Sep 19.

ChIP-Seq 及其相关技术在免疫功能研究中的应用。

Application of ChIP-Seq and related techniques to the study of immune function.

机构信息

Laboratory of Molecular Immunology, National Heart, Lung and Blood Institute, National Institutes of Health, 9000 Rockville Pike, Bethesda, MD 20892, USA.

出版信息

Immunity. 2011 Jun 24;34(6):830-42. doi: 10.1016/j.immuni.2011.06.002.

DOI:10.1016/j.immuni.2011.06.002
PMID:21703538
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3137373/
Abstract

Behaviors observed at the cellular level such as development and acquisition of effector functions by immune cells result from transcriptional changes. The biochemical mediators of transcription are sequence-specific transcription factors (TFs), chromatin modifying enzymes, and chromatin, the complex of DNA and histone proteins. Covalent modification of DNA and histones, also termed epigenetic modification, influences the accessibility of target sequences for transcription factors on chromatin and the expression of linked genes required for immune functions. Genome-wide techniques such as ChIP-Seq have described the entire "cistrome" of transcription factors involved in specific developmental steps of B and T cells and started to define specific immune responses in terms of the binding profiles of critical effectors and epigenetic modification patterns. Current data suggest that both promoters and enhancers are prepared for action at different stages of activation by epigenetic modification through distinct transcription factors in different cells.

摘要

在细胞水平上观察到的行为,如免疫细胞效应功能的获得和发育,是转录变化的结果。转录的生化介质是序列特异性转录因子(TFs)、染色质修饰酶和染色质,即 DNA 和组蛋白蛋白的复合物。DNA 和组蛋白的共价修饰,也称为表观遗传修饰,影响染色质上靶序列对转录因子的可及性以及免疫功能所需的相关基因的表达。全基因组技术,如 ChIP-Seq,描述了参与 B 和 T 细胞特定发育步骤的所有“转录因子组”,并开始根据关键效应因子的结合谱和表观遗传修饰模式来定义特定的免疫反应。目前的数据表明,在激活的不同阶段,通过不同细胞中的不同转录因子,启动子和增强子都通过表观遗传修饰为作用做好了准备。