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流式细胞术红色荧光蛋白及生物传感器指南

Guide to red fluorescent proteins and biosensors for flow cytometry.

作者信息

Piatkevich Kiryl D, Verkhusha Vladislav V

机构信息

Department of Anatomy and Structural Biology, and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, New York, USA.

出版信息

Methods Cell Biol. 2011;102:431-61. doi: 10.1016/B978-0-12-374912-3.00017-1.

DOI:10.1016/B978-0-12-374912-3.00017-1
PMID:21704849
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3987785/
Abstract

Since the discovery of the first red fluorescent protein (RFP), named DsRed, 12 years ago, a wide pallet of red-shifted fluorescent proteins has been cloned and biotechnologically developed into monomeric fluorescent probes for optical microscopy. Several new types of monomeric RFPs that change the emission wavelength either with time, called fluorescent timers, or after a brief irradiation with violet light, known as photoactivatable proteins, have been also engineered. Moreover, RFPs with a large Stokes shift of fluorescence emission have been recently designed. Because of their distinctive excitation and fluorescence detection conditions developed specifically for microscopy, these fluorescent probes can be suboptimal for flow cytometry. Here, we have selected and summarized the advanced orange, red, and far-red fluorescent proteins with the properties specifically required for the flow cytometry applications. Their effective brightness was calculated for the laser sources available for the commercial flow cytometers and sorters. Compatibility of the fluorescent proteins of different colors in a multiparameter flow cytometry was determined. Novel FRET pairs, utilizing RFPs, RFP-based intracellular biosensors, and their application to a high-throughput screening, are also discussed.

摘要

自12年前发现首个红色荧光蛋白(RFP)——DsRed以来,一系列红移荧光蛋白已被克隆,并通过生物技术开发成用于光学显微镜的单体荧光探针。还构建了几种新型单体RFP,它们要么随时间改变发射波长(称为荧光定时器),要么在短暂照射紫光后改变发射波长(称为光激活蛋白)。此外,最近还设计了具有大斯托克斯位移荧光发射的RFP。由于这些荧光探针具有专门为显微镜开发的独特激发和荧光检测条件,因此对于流式细胞术而言可能并非最佳选择。在此,我们挑选并总结了具有流式细胞术应用所需特定特性的先进橙色、红色和远红色荧光蛋白。针对商用流式细胞仪和分选仪可用的激光源计算了它们的有效亮度。确定了不同颜色荧光蛋白在多参数流式细胞术中的兼容性。还讨论了利用RFP的新型荧光共振能量转移(FRET)对、基于RFP的细胞内生物传感器及其在高通量筛选中的应用。

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本文引用的文献

1
Engineering ESPT pathways based on structural analysis of LSSmKate red fluorescent proteins with large Stokes shift.基于大斯托克斯位移 LSSmKate 红色荧光蛋白结构分析的工程 ESPT 途径。
J Am Chem Soc. 2010 Aug 11;132(31):10762-70. doi: 10.1021/ja101974k.
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Fluorescent proteins and their applications in imaging living cells and tissues.荧光蛋白及其在活细胞和组织成像中的应用。
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Far-red fluorescent protein excitable with red lasers for flow cytometry and superresolution STED nanoscopy.远红荧光蛋白可被红光激光激发,适用于流式细胞术和超高分辨率 STED 纳米显微镜。
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Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins.mTagBFP和TagRFP荧光蛋白中含酰亚胺的蓝色和红色发色团的结构表征
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Monomeric red fluorescent proteins with a large Stokes shift.单体型红色荧光蛋白,具有较大的斯托克斯位移。
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A flow cytometry-based FRET assay to identify and analyse protein-protein interactions in living cells.基于流式细胞术的 FRET 测定法,用于鉴定和分析活细胞中的蛋白质-蛋白质相互作用。
PLoS One. 2010 Feb 22;5(2):e9344. doi: 10.1371/journal.pone.0009344.
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Use of bicistronic vectors in combination with flow cytometry to screen for effective small interfering RNA target sequences.利用双顺反子载体与流式细胞术相结合筛选有效的小干扰 RNA 靶序列。
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Fluorescent protein tracking and detection: applications using fluorescent proteins in living cells.荧光蛋白追踪与检测:荧光蛋白在活细胞中的应用
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Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores.理解单体荧光示踪剂中的蓝到红的转换以及其生色团的水解降解。
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