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研究希瓦氏菌属 oneidensis 的电子传递链及其二血红素细胞色素 c 过氧化物酶 CcpA 的催化活性。

Investigation of the electron transport chain to and the catalytic activity of the diheme cytochrome c peroxidase CcpA of Shewanella oneidensis.

机构信息

Institut für Biologie II, Mikrobiologie, Universität Freiburg, Schänzlestr. 1, D-79104 Freiburg, Germany.

出版信息

Appl Environ Microbiol. 2011 Sep;77(17):6172-80. doi: 10.1128/AEM.00606-11. Epub 2011 Jul 8.

Abstract

Bacterial diheme c-type cytochrome peroxidases (BCCPs) catalyze the periplasmic reduction of hydrogen peroxide to water. The gammaproteobacterium Shewanella oneidensis produces the peroxidase CcpA under a number of anaerobic conditions, including dissimilatory iron-reducing conditions. We wanted to understand the function of this protein in the organism and its putative connection to the electron transport chain to ferric iron. CcpA was isolated and tested for peroxidase activity, and its structural conformation was analyzed by X-ray crystallography. CcpA exhibited in vitro peroxidase activity and had a structure typical of diheme peroxidases. It was produced in almost equal amounts under anaerobic and microaerophilic conditions. With 50 mM ferric citrate and 50 μM oxygen in the growth medium, CcpA expression results in a strong selective advantage for the cell, which was detected in competitive growth experiments with wild-type and ΔccpA mutant cells that lack the entire ccpA gene due to a markerless deletion. We were unable to reduce CcpA directly with CymA, MtrA, or FccA, which are known key players in the chain of electron transport to ferric iron and fumarate but identified the small monoheme ScyA as a mediator of electron transport between CymA and BCCP. To our knowledge, this is the first detailed description of a complete chain of electron transport to a periplasmic c-type cytochrome peroxidase. This study furthermore reports the possibility of establishing a specific electron transport chain using c-type cytochromes.

摘要

细菌二血红素 c 型细胞色素过氧化物酶(BCCPs)催化过氧化氢在周质中的还原为水。γ变形菌希瓦氏菌在许多厌氧条件下产生过氧化物酶 CcpA,包括异化铁还原条件。我们希望了解该蛋白在生物体中的功能及其与电子传递链到高铁的潜在联系。分离 CcpA 并测试其过氧化物酶活性,并通过 X 射线晶体学分析其结构构象。CcpA 表现出体外过氧化物酶活性,并且具有二血红素过氧化物酶的典型结构。在厌氧和微需氧条件下几乎等量产生。在生长培养基中含有 50 mM 柠檬酸铁和 50 μM 氧气的情况下,CcpA 的表达导致细胞具有很强的选择优势,这在竞争生长实验中得以检测,该实验使用野生型和缺乏整个 ccpA 基因的ΔccpA 突变细胞进行,该基因由于无标记缺失而缺失。我们无法直接用 CymA、MtrA 或 FccA 还原 CcpA,这些都是电子传递到高铁和延胡索酸的关键因子,但鉴定出小单血红素 ScyA 是 CymA 和 BCCP 之间电子传递的介质。据我们所知,这是第一个详细描述完整的电子传递链到周质 c 型细胞色素过氧化物酶的报告。本研究进一步报告了使用 c 型细胞色素建立特定电子传递链的可能性。

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本文引用的文献

1
Quantifying hydrogen peroxide in iron-containing solutions using leuco crystal violet.
Geochem Trans. 2005 Jun 14;6(3):47. doi: 10.1186/1467-4866-6-47. eCollection 2005.
2
Impacts of Shewanella oneidensis c-type cytochromes on aerobic and anaerobic respiration.
Microb Biotechnol. 2010 Jul;3(4):455-66. doi: 10.1111/j.1751-7915.2010.00181.x.
3
A simple and fast method to analyze the orientation of c-type cytochromes in the outer membrane of Gram-negative bacteria.
J Microbiol Methods. 2010 Aug;82(2):184-6. doi: 10.1016/j.mimet.2010.04.011. Epub 2010 May 6.
4
Features and development of Coot.
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.
5
Characterization of an electron conduit between bacteria and the extracellular environment.
Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22169-74. doi: 10.1073/pnas.0900086106. Epub 2009 Dec 17.
6
Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1.
Appl Environ Microbiol. 2009 Dec;75(24):7789-96. doi: 10.1128/AEM.01834-09. Epub 2009 Oct 16.
7
CcpA from Geobacter sulfurreducens is a basic di-heme cytochrome c peroxidase.
J Mol Biol. 2009 Nov 6;393(4):951-65. doi: 10.1016/j.jmb.2009.09.001. Epub 2009 Sep 6.
8
Enzymatic assembly of DNA molecules up to several hundred kilobases.
Nat Methods. 2009 May;6(5):343-5. doi: 10.1038/nmeth.1318. Epub 2009 Apr 12.
10
Towards environmental systems biology of Shewanella.
Nat Rev Microbiol. 2008 Aug;6(8):592-603. doi: 10.1038/nrmicro1947. Epub 2008 Jul 7.

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