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从隐喻到实践:“信息工程师”在第一个 DNA 序列数据库中的引入。

From metaphor to practices: The introduction of "information engineers" into the first DNA sequence database.

机构信息

Departamento de Ciencia, Tecnología y Sociedad, Consejo Superior de Investigaciones Científicas (CSIC), Calle Albasanz 26-28, 28037 Madrid, Spain.

出版信息

Hist Philos Life Sci. 2011;33(1):71-104.

Abstract

This paper explores the introduction of professional systems engineers and information management practices into the first centralized DNA sequence database, developed at the European Molecular Biology Laboratory (EMBL) during the 1980s. In so doing, it complements the literature on the emergence of an information discourse after World War II and its subsequent influence in biological research. By the careers of the database creators and the computer algorithms they designed, analyzing, from the mid-1960s onwards information in biology gradually shifted from a pervasive metaphor to be embodied in practices and professionals such as those incorporated at the EMBL. I then investigate the reception of these database professionals by the EMBL biological staff, which evolved from initial disregard to necessary collaboration as the relationship between DNA, genes, and proteins turned out to be more complex than expected. The trajectories of the database professionals at the EMBL suggest that the initial subject matter of the historiography of genomics should be the long-standing practices that emerged after World War II and to a large extent originated outside biomedicine and academia. Only after addressing these practices, historians may turn to their further disciplinary assemblage in fields such as bioinformatics or biotechnology.

摘要

本文探讨了专业系统工程师和信息管理实践在 20 世纪 80 年代欧洲分子生物学实验室(EMBL)开发的第一个集中式 DNA 序列数据库中的引入。这样做,它补充了关于第二次世界大战后信息话语的出现及其随后对生物研究影响的文献。通过数据库创建者的职业生涯以及他们设计的计算机算法,从 20 世纪 60 年代中期开始,生物学中的信息分析逐渐从普遍的隐喻转变为在 EMBL 等机构中融入的实践和专业人员所体现的隐喻。然后,我调查了 EMBL 生物人员对这些数据库专业人员的接受程度,这种接受程度从最初的忽视演变为必要的合作,因为 DNA、基因和蛋白质之间的关系比预期的要复杂得多。EMBL 数据库专业人员的轨迹表明,基因组学史学的最初主题应该是第二次世界大战后出现的长期实践,而且在很大程度上起源于生物医学和学术界之外。只有在解决了这些实践问题之后,历史学家才可能将注意力转向生物信息学或生物技术等领域的进一步学科组合。

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