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全基因组关联研究在欧洲史蒂文斯-约翰逊综合征和中毒性表皮坏死松解症。

Genome-wide association study of Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis in Europe.

机构信息

Inserm U, Paris, France.

出版信息

Orphanet J Rare Dis. 2011 Jul 29;6:52. doi: 10.1186/1750-1172-6-52.

DOI:10.1186/1750-1172-6-52
PMID:21801394
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3173287/
Abstract

BACKGROUND

Stevens-Johnson syndrome (SJS) and Toxic Epidermal Necrolysis (TEN) are rare but extremely severe cutaneous adverse drug reactions in which drug-specific associations with HLA-B alleles were described.

OBJECTIVES

To investigate genetic association at a genome-wide level on a large sample of SJS/TEN patients.

METHODS

We performed a genome wide association study on a sample of 424 European cases and 1,881 controls selected from a Reference Control Panel.

RESULTS

Six SNPs located in the HLA region showed significant evidence for association (OR range: 1.53-1.74). The haplotype formed by their risk allele was more associated with the disease than any of the single SNPs and was even much stronger in patients exposed to allopurinol (OR(allopurinol) = 7.77, 95%CI = [4.66; 12.98]). The associated haplotype is in linkage disequilibrium with the HLA-B*5801 allele known to be associated with allopurinol induced SJS/TEN in Asian populations.

CONCLUSION

The involvement of genetic variants located in the HLA region in SJS/TEN is confirmed in European samples, but no other locus reaches genome-wide statistical significance in this sample that is also the largest one collected so far. If some loci outside HLA play a role in SJS/TEN, their effect is thus likely to be very small.

摘要

背景

史蒂文斯-约翰逊综合征(SJS)和中毒性表皮坏死松解症(TEN)是罕见但极其严重的药物不良反应,其中描述了药物与 HLA-B 等位基因的特异性关联。

目的

在大型 SJS/TEN 患者样本中进行全基因组水平的遗传关联研究。

方法

我们对来自参考对照面板的 424 例欧洲病例和 1881 例对照进行了全基因组关联研究。

结果

位于 HLA 区域的 6 个 SNP 显示出与疾病显著相关的证据(OR 范围:1.53-1.74)。由其风险等位基因形成的单倍型与疾病的相关性强于任何单个 SNP,并且在暴露于别嘌醇的患者中更为显著(OR(allopurinol) = 7.77, 95%CI = [4.66; 12.98])。相关单倍型与 HLA-B*5801 等位基因呈连锁不平衡,已知该等位基因与亚洲人群中的别嘌醇诱导的 SJS/TEN 相关。

结论

位于 HLA 区域的遗传变异在欧洲样本中证实了 SJS/TEN 的参与,但在该样本中,没有其他基因座达到全基因组统计学意义,该样本也是迄今为止收集到的最大样本。如果 HLA 以外的某些基因座在 SJS/TEN 中起作用,那么它们的作用可能非常小。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/9ce5a92b4aa4/1750-1172-6-52-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/faf9c2cc7efa/1750-1172-6-52-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/8d7411554475/1750-1172-6-52-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/c4508fb0722d/1750-1172-6-52-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/9fa4889fb18a/1750-1172-6-52-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/9ce5a92b4aa4/1750-1172-6-52-5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/faf9c2cc7efa/1750-1172-6-52-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/8d7411554475/1750-1172-6-52-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/c4508fb0722d/1750-1172-6-52-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/9fa4889fb18a/1750-1172-6-52-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01da/3173287/9ce5a92b4aa4/1750-1172-6-52-5.jpg

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