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莫兰种群和赖特-费希尔种群中的多步进化速率。

The rate of multi-step evolution in Moran and Wright-Fisher populations.

作者信息

Proulx Stephen R

机构信息

Ecology, Evolution and Marine Biology Department, UC Santa Barbara, Santa Barbara, CA 93106, USA.

出版信息

Theor Popul Biol. 2011 Nov;80(3):197-207. doi: 10.1016/j.tpb.2011.07.003. Epub 2011 Jul 23.

Abstract

Several groups have recently modeled evolutionary transitions from an ancestral allele to a beneficial allele separated by one or more intervening mutants. The beneficial allele can become fixed if a succession of intermediate mutants are fixed or alternatively if successive mutants arise while the previous intermediate mutant is still segregating. This latter process has been termed stochastic tunneling. Previous work has focused on the Moran model of population genetics. I use elementary methods of analyzing stochastic processes to derive the probability of tunneling in the limit of large population size for both Moran and Wright-Fisher populations. I also show how to efficiently obtain numerical results for finite populations. These results show that the probability of stochastic tunneling is twice as large under the Wright-Fisher model as it is under the Moran model.

摘要

最近有几个研究小组对从祖先等位基因到被一个或多个中间突变体隔开的有益等位基因的进化转变进行了建模。如果一系列中间突变体被固定,或者在前一个中间突变体仍在分离时连续出现突变体,有益等位基因就可以被固定。后一种过程被称为随机隧道效应。之前的工作主要集中在群体遗传学的莫兰模型上。我使用分析随机过程的基本方法,推导出莫兰群体和赖特-费希尔群体在大群体规模极限下的隧道效应概率。我还展示了如何有效地获得有限群体的数值结果。这些结果表明,在赖特-费希尔模型下随机隧道效应的概率是莫兰模型下的两倍。

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