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利用水信号检测丝氨酸蛋白酶催化三联体中不可见的交换质子。

Using the water signal to detect invisible exchanging protons in the catalytic triad of a serine protease.

机构信息

Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.

出版信息

J Biomol NMR. 2011 Aug;50(4):299-314. doi: 10.1007/s10858-011-9527-z. Epub 2011 Jul 22.

Abstract

Chemical Exchange Saturation Transfer (CEST) is an MRI approach that can indirectly detect exchange broadened protons that are invisible in traditional NMR spectra. We modified the CEST pulse sequence for use on high-resolution spectrometers and developed a quantitative approach for measuring exchange rates based upon CEST spectra. This new methodology was applied to the rapidly exchanging Hδ1 and Hε2 protons of His57 in the catalytic triad of bovine chymotrypsinogen-A (bCT-A). CEST enabled observation of Hε2 at neutral pH values, and also allowed measurement of solvent exchange rates for His57-Hδ1 and His57-Hε2 across a wide pH range (3-10). Hδ1 exchange was only dependent upon the charge state of the His57 (k (ex,Im+) = 470 s(-1), k (ex,Im) = 50 s(-1)), while Hε2 exchange was found to be catalyzed by hydroxide ion and phosphate base (k(OH)⁻ = 1.7 × 10(10) M(-1) s(-1), K(HPO)²⁻₄ = 1.7 × 10(6) M(-1) s(-1)), reflecting its greater exposure to solute catalysts. Concomitant with the disappearance of the Hε2 signal as the pH was increased above its pK (a), was the appearance of a novel signal (δ = 12 ppm), which we assigned to Hγ of the nearby Ser195 nucleophile, that is hydrogen bonded to Nε2 of neutral His57. The chemical shift of Hγ is about 7 ppm downfield from a typical hydroxyl proton, suggesting a highly polarized O-Hγ bond. The significant alkoxide character of Oγ indicates that Ser195 is preactivated for nucleophilic attack before substrate binding. CEST should be generally useful for mechanistic investigations of many enzymes with labile protons involved in active site chemistry.

摘要

化学交换饱和转移(CEST)是一种 MRI 方法,可以间接检测在传统 NMR 谱中不可见的交换展宽质子。我们修改了 CEST 脉冲序列,使其可用于高分辨率光谱仪,并开发了一种基于 CEST 谱测量交换率的定量方法。这种新方法应用于牛胰凝乳蛋白酶原 A(bCT-A)催化三联体中 His57 的快速交换 Hδ1 和 Hε2 质子。CEST 使 Hε2 能够在中性 pH 值下被观察到,并且还允许在很宽的 pH 范围内(3-10)测量 His57-Hδ1 和 His57-Hε2 的溶剂交换率。Hδ1 交换仅取决于 His57 的电荷状态(k(ex,Im+) = 470 s(-1),k(ex,Im) = 50 s(-1)),而 Hε2 交换被发现由氢氧根离子和磷酸碱催化(k(OH)⁻ = 1.7 × 10(10) M(-1) s(-1),K(HPO)²⁻₄ = 1.7 × 10(6) M(-1) s(-1)),反映出它更暴露于溶质催化剂。随着 pH 值升高超过其 pKa(a),Hε2 信号的消失伴随着一个新信号(δ = 12 ppm)的出现,我们将其分配给附近 Ser195 亲核试剂的 Hγ,该亲核试剂与中性 His57 的 Nε2 形成氢键。Hγ 的化学位移比典型的羟基质子低约 7 ppm,表明 O-Hγ 键具有高度极化性。Oγ 的显著烷氧基特征表明,在底物结合之前,Ser195 已预先活化以进行亲核攻击。CEST 应该对涉及活性位点化学的许多具有不稳定质子的酶的机制研究具有普遍意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e3/3149851/cd7ef222ecdf/nihms286254f1.jpg

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