Institute of Molecular and Clinical Immunology, Otto-von-Guericke University, Magdeburg, Germany.
PLoS Comput Biol. 2011 Aug;7(8):e1002121. doi: 10.1371/journal.pcbi.1002121. Epub 2011 Aug 4.
T cells orchestrate the adaptive immune response, making them targets for immunotherapy. Although immunosuppressive therapies prevent disease progression, they also leave patients susceptible to opportunistic infections. To identify novel drug targets, we established a logical model describing T-cell receptor (TCR) signaling. However, to have a model that is able to predict new therapeutic approaches, the current drug targets must be included. Therefore, as a next step we generated the interleukin-2 receptor (IL-2R) signaling network and developed a tool to merge logical models. For IL-2R signaling, we show that STAT activation is independent of both Src- and PI3-kinases, while ERK activation depends upon both kinases and additionally requires novel PKCs. In addition, our merged model correctly predicted TCR-induced STAT activation. The combined network also allows information transfer from one receptor to add detail to another, thereby predicting that LAT mediates JNK activation in IL-2R signaling. In summary, the merged model not only enables us to unravel potential cross-talk, but it also suggests new experimental designs and provides a critical step towards designing strategies to reprogram T cells.
T 细胞调控适应性免疫反应,使其成为免疫疗法的靶点。虽然免疫抑制疗法可以防止疾病进展,但也使患者容易受到机会性感染。为了确定新的药物靶点,我们建立了一个描述 T 细胞受体 (TCR) 信号的逻辑模型。然而,为了使模型能够预测新的治疗方法,必须包括当前的药物靶点。因此,作为下一步,我们生成了白细胞介素-2 受体 (IL-2R) 信号网络,并开发了一种用于合并逻辑模型的工具。对于 IL-2R 信号,我们表明 STAT 的激活独立于Src 和 PI3-kinases,而 ERK 的激活既依赖于这两种激酶,又需要新的 PKC。此外,我们合并的模型正确预测了 TCR 诱导的 STAT 激活。组合网络还允许从一个受体向另一个受体传递信息,从而预测 LAT 在 IL-2R 信号中介导 JNK 的激活。总之,合并的模型不仅使我们能够揭示潜在的串扰,还为设计实验提供了新的思路,并为重新编程 T 细胞提供了一个关键步骤。