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Catalysis by dihydrofolate reductase and other enzymes arises from electrostatic preorganization, not conformational motions.
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2
The catalytic effect of dihydrofolate reductase and its mutants is determined by reorganization energies.
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Catalytic efficiency of enzymes: a theoretical analysis.
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On the relationship between thermal stability and catalytic power of enzymes.
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Relating protein motion to catalysis.
Annu Rev Biochem. 2006;75:519-41. doi: 10.1146/annurev.biochem.75.103004.142800.
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Sensitivity of Functional Loop Conformations on Long-Range Electrostatics: Implications for M20 Loop Dynamics in Dihydrofolate Reductase.
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Defining the role of active-site loop fluctuations in dihydrofolate reductase catalysis.
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Temporally overlapped but uncoupled motions in dihydrofolate reductase catalysis.
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Preorganized Electric Fields in Voltage-Gated Sodium Channels.
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Electrostatic Preorganization in Three Distinct Heterogeneous Proteasome β-Subunits.
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CHARMM-GUI QM/MM Interfacer for a Quantum Mechanical and Molecular Mechanical (QM/MM) Simulation Setup: 1. Semiempirical Methods.
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本文引用的文献

2
Protein dynamics and enzyme catalysis: insights from simulations.
Biochim Biophys Acta. 2011 Aug;1814(8):1077-92. doi: 10.1016/j.bbapap.2010.12.002. Epub 2010 Dec 15.
3
The role of conformational entropy in molecular recognition by calmodulin.
Nat Chem Biol. 2010 May;6(5):352-8. doi: 10.1038/nchembio.347. Epub 2010 Apr 11.
4
Ketosteroid isomerase provides further support for the idea that enzymes work by electrostatic preorganization.
Proc Natl Acad Sci U S A. 2010 Mar 2;107(9):4075-80. doi: 10.1073/pnas.0914579107. Epub 2010 Feb 11.
6
Hidden alternative structures of proline isomerase essential for catalysis.
Nature. 2009 Dec 3;462(7273):669-73. doi: 10.1038/nature08615.
7
Enzyme millisecond conformational dynamics do not catalyze the chemical step.
Proc Natl Acad Sci U S A. 2009 Oct 13;106(41):17359-64. doi: 10.1073/pnas.0909150106. Epub 2009 Sep 25.
8
The energetics of the primary proton transfer in bacteriorhodopsin revisited: it is a sequential light-induced charge separation after all.
Biochim Biophys Acta. 2008 May;1777(5):441-52. doi: 10.1016/j.bbabio.2008.03.001. Epub 2008 Mar 14.
9
On the relationship between thermal stability and catalytic power of enzymes.
Biochemistry. 2007 Dec 25;46(51):15076-88. doi: 10.1021/bi701732a. Epub 2007 Dec 1.
10
A hierarchy of timescales in protein dynamics is linked to enzyme catalysis.
Nature. 2007 Dec 6;450(7171):913-6. doi: 10.1038/nature06407. Epub 2007 Nov 18.

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