Department of Bioprocess Technology, Faculty of Biotechnology and Biomolecular Sciences, University Putra Malaysia, 43400 Serdang, Selangor, Malaysia.
J Ind Microbiol Biotechnol. 2012 Feb;39(2):243-54. doi: 10.1007/s10295-011-1019-3. Epub 2011 Aug 11.
Response surface methodology (RSM) and artificial neural network (ANN) were used to optimize the effect of four independent variables, viz. glucose, sodium chloride (NaCl), temperature and induction time, on lipase production by a recombinant Escherichia coli BL21. The optimization and prediction capabilities of RSM and ANN were then compared. RSM predicted the dependent variable with a good coefficient of correlation determination (R² and adjusted R² values for the model. Although the R (2) value showed a good fit, absolute average deviation (AAD) and root mean square error (RMSE) values did not support the accuracy of the model and this was due to the inferiority in predicting the values towards the edges of the design points. On the other hand, ANN-predicted values were closer to the observed values with better R², adjusted R², AAD and RMSE values and this was due to the capability of predicting the values throughout the selected range of the design points. Similar to RSM, ANN could also be used to rank the effect of variables. However, ANN could not predict the interactive effect between the variables as performed by RSM. The optimum levels for glucose, NaCl, temperature and induction time predicted by RSM are 32 g/L, 5 g/L, 32°C and 2.12 h, and those by ANN are 25 g/L, 3 g/L, 30°C and 2 h, respectively. The ANN-predicted optimal levels gave higher lipase activity (55.8 IU/mL) as compared to RSM-predicted levels (50.2 IU/mL) and the predicted lipase activity was also closer to the observed data at these levels, suggesting that ANN is a better optimization method than RSM for lipase production by the recombinant strain.
响应面法(RSM)和人工神经网络(ANN)被用于优化四个独立变量(葡萄糖、氯化钠(NaCl)、温度和诱导时间)对重组大肠杆菌 BL21 产脂肪酶的影响。然后比较了 RSM 和 ANN 的优化和预测能力。RSM 用良好的相关系数确定度(R² 和调整 R² 值)预测了因变量。虽然 R² 值显示出良好的拟合度,但绝对平均偏差(AAD)和均方根误差(RMSE)值并不支持模型的准确性,这是由于模型在预测设计点边缘的值时存在不足。另一方面,ANN 预测的值与观察值更接近,具有更好的 R²、调整 R²、AAD 和 RMSE 值,这是由于 ANN 能够在所选设计点范围内预测值。与 RSM 类似,ANN 也可用于对变量的影响进行排序。然而,ANN 无法像 RSM 那样预测变量之间的交互作用。RSM 预测的葡萄糖、NaCl、温度和诱导时间的最佳水平分别为 32 g/L、5 g/L、32°C 和 2.12 h,而 ANN 预测的最佳水平分别为 25 g/L、3 g/L、30°C 和 2 h。与 RSM 预测的水平相比,ANN 预测的最佳水平产生的脂肪酶活性更高(55.8 IU/mL),并且在这些水平下,预测的脂肪酶活性也更接近观察数据,这表明 ANN 是一种比 RSM 更好的优化方法,用于生产重组菌的脂肪酶。