Microbiology Laboratory, Department of Chemical and Environmental Sciences, University of Limerick, Limerick, Ireland.
BMC Microbiol. 2011 Aug 30;11:194. doi: 10.1186/1471-2180-11-194.
Ralstonia pickettii is a nosocomial infectious agent and a significant industrial contaminant. It has been found in many different environments including clinical situations, soil and industrial High Purity Water. This study compares the phenotypic and genotypic diversity of a selection of strains of Ralstonia collected from a variety of sources.
Ralstonia isolates (fifty-nine) from clinical, industrial and environmental origins were compared genotypically using i) Species-specific-PCR, ii) PCR and sequencing of the 16S-23S rRNA Interspatial region (ISR) iii) the fliC gene genes, iv) RAPD and BOX-PCR and v) phenotypically using biochemical testing. The species specific-PCR identified fifteen out of fifty-nine designated R. pickettii isolates as actually being the closely related species R. insidiosa. PCR-ribotyping of the 16S-23S rRNA ISR indicated few major differences between the isolates. Analysis of all isolates demonstrated different banding patterns for both the RAPD and BOX primers however these were found not to vary significantly.
R. pickettii species isolated from wide geographic and environmental sources appear to be reasonably homogenous based on genotypic and phenotypic characteristics. R. insidiosa can at present only be distinguished from R. pickettii using species specific PCR. R. pickettii and R. insidiosa isolates do not differ significantly phenotypically or genotypically based on environmental or geographical origin.
恶臭假单胞菌是一种医院感染病原体,也是一种重要的工业污染物。它存在于许多不同的环境中,包括临床情况、土壤和工业高纯水。本研究比较了从各种来源收集的恶臭假单胞菌选择株的表型和基因型多样性。
从临床、工业和环境来源分离的恶臭假单胞菌(59 株)通过以下方法进行基因型比较:i)种特异性-PCR,ii)16S-23S rRNA 间隔区(ISR)的 PCR 和测序,iii) fliC 基因,iv)RAPD 和 BOX-PCR,v)表型生化试验。种特异性-PCR 鉴定出 59 株指定的恶臭假单胞菌中有 15 株实际上是密切相关的物种 R. insidiosa。16S-23S rRNA ISR 的 PCR-核糖体分型表明,这些分离株之间几乎没有明显差异。对所有分离株的分析表明,RAPD 和 BOX 引物的条带模式均不同,但差异不显著。
从广泛的地理和环境来源分离的恶臭假单胞菌种在表型和基因型特征上似乎相当同质。目前,只能使用种特异性 PCR 将 R. insidiosa 与 R. pickettii 区分开来。恶臭假单胞菌和 R. insidiosa 分离株在表型或基因型上没有明显差异,无论其环境或地理来源如何。