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嗜热化能自养型菌株Pyrolobus fumarii模式菌株（1A）的全基因组序列

Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A).

作者信息

Anderson Iain, Göker Markus, Nolan Matt, Lucas Susan, Hammon Nancy, Deshpande Shweta, Cheng Jan-Fang, Tapia Roxanne, Han Cliff, Goodwin Lynne, Pitluck Sam, Huntemann Marcel, Liolios Konstantinos, Ivanova Natalia, Pagani Ioanna, Mavromatis Konstantinos, Ovchinikova Galina, Pati Amrita, Chen Amy, Palaniappan Krishna, Land Miriam, Hauser Loren, Brambilla Evelyne-Marie, Huber Harald, Yasawong Montri, Rohde Manfred, Spring Stefan, Abt Birte, Sikorski Johannes, Wirth Reinhard, Detter John C, Woyke Tanja, Bristow James, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Kyrpides Nikos C, Klenk Hans-Peter, Lapidus Alla

出版信息

Stand Genomic Sci. 2011 Jul 1;4(3):381-92. doi: 10.4056/sigs.2014648.

DOI:10.4056/sigs.2014648
PMID:21886865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3156397/
Abstract

Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106°C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

嗜热栖热袍菌（Pyrolobus fumarii）由布洛赫等人于1997年发现，是栖热袍菌属的模式种，属于泉古菌门火盘菌科。该物种是一种兼性微需氧、不运动的泉古菌。它之所以受到关注，是因为其在生命树中独特的系统发育位置，还因为它是一种超嗜热化学无机自养菌，是深海热液喷口处已知的主要有机物生产者。嗜热栖热袍菌目前展现出地球上所有生命形式中最高的最适生长温度（106°C）。这是栖热袍菌属成员已发表的首个完整基因组序列，也是火盘菌科成员的第二个基因组序列。尽管迪弗萨公司于2001年9月25日宣布完成了嗜热栖热袍菌基因组的测序，但该序列从未向公众发布。这个长度为1,843,267 bp的基因组包含1,986个蛋白质编码基因和52个RNA基因，是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/232256e03a93/sigs.2014648-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/b036edab8e25/sigs.2014648-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/452746990e28/sigs.2014648-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/457562de6d54/sigs.2014648-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/86c474056654/sigs.2014648-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/232256e03a93/sigs.2014648-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/b036edab8e25/sigs.2014648-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/452746990e28/sigs.2014648-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/457562de6d54/sigs.2014648-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/86c474056654/sigs.2014648-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/242b/3156397/232256e03a93/sigs.2014648-f5.jpg

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