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肠杆菌沙雷氏菌噬菌体 ES2 的基因组序列分析。

Genomic sequence analysis of virulent Cronobacter sakazakii bacteriophage ES2.

机构信息

Department of Food Science and Biotechnology, Kyungwon University, Sungnam-Si, Kyunggi-Do 461-701, South Korea.

出版信息

Arch Virol. 2011 Nov;156(11):2105-8. doi: 10.1007/s00705-011-1096-7. Epub 2011 Sep 20.

Abstract

Virulent Cronobacter sakazakii bacteriophage ES2 was isolated from swine fecal samples, and the genome sequence by was determined GS-Flx. Bacteriophage ES2 had a double-stranded DNA genome with a length of 22,162 bp and a G+C content of 50.08%. The morphological characteristics under a transmission electron microscope indicated that bacteriophage ES2 belongs to the family Myoviridae. The structural proteins, including the phage coat protein, were separated by SDS-PAGE and identified by Q-TOF. Bioinformatics analysis of the bacteriophage genome revealed 30 putative open reading frames (ORFs). The predicted protein products of the ORFs were determined and described. To our knowledge, the genome of the newly isolated bacteriophage ES2 was not significantly similar to that of any previously reported bacteriophages of members of the family Enterobacteriaceae.

摘要

毒力强的阪崎克罗诺杆菌噬菌体 ES2 从猪粪便样本中分离出来,并通过 GS-Flx 确定了其基因组序列。噬菌体 ES2 有一个长度为 22162bp、GC 含量为 50.08%的双链 DNA 基因组。透射电子显微镜下的形态特征表明,噬菌体 ES2 属于肌尾噬菌体科。SDS-PAGE 分离和 Q-TOF 鉴定了噬菌体的结构蛋白,包括噬菌体衣壳蛋白。噬菌体基因组的生物信息学分析显示有 30 个推定的开放阅读框(ORFs)。预测了 ORFs 的蛋白产物,并进行了描述。据我们所知,新分离的噬菌体 ES2 的基因组与肠杆菌科任何先前报道的噬菌体都没有显著相似性。

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