Laboratory of Neural Control, Section on Developmental Neurobiology, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland 20892, USA.
J Neurosci. 2011 Oct 12;31(41):14611-23. doi: 10.1523/JNEUROSCI.2186-11.2011.
The neuronal connectivity dataset of the nematode Caenorhabditis elegans attracts wide attention from computational neuroscientists and experimentalists. However, the dataset is incomplete. The ventral and dorsal nerve cords of a single nematode were reconstructed halfway along the body and the posterior data are missing, leaving 21 of 75 motoneurons of the locomotor network with partial or no connectivity data. Using a new framework for network analysis, the perimotor space, we identified rules of connectivity that allowed us to approximate the missing data by extrapolation. Motoneurons were mapped into perimotor space in which each motoneuron is located according to the muscle cells it innervates. In this framework, a pattern of iterative connections emerges which includes most (0.90) of the connections. We identified a repeating unit consisting of 12 motoneurons and 12 muscle cells. The cell bodies of the motoneurons of such a unit are not necessarily anatomical neighbors and there is no obvious anatomical segmentation. A connectivity model, composed of six repeating units, is a description of the network that is both simplified (modular and without noniterative connections) and more complete (includes the posterior part) than the original dataset. The perimotor framework of observed connectivity and the segmented connectivity model give insights and advance the study of the neuronal infrastructure underlying locomotion in C. elegans. Furthermore, we suggest that the tools used herein may be useful to interpret, simplify, and represent connectivity data of other motor systems.
秀丽隐杆线虫的神经元连接数据集吸引了计算神经科学家和实验人员的广泛关注。然而,该数据集并不完整。单个线虫的腹侧和背侧神经索在身体中间被重建,后部数据缺失,运动网络的 75 个运动神经元中有 21 个存在部分或完全没有连接数据。使用网络分析的新框架——运动前空间,我们确定了连接规则,允许通过外推来近似缺失的数据。运动神经元被映射到运动前空间中,每个运动神经元根据其支配的肌肉细胞来定位。在这个框架中,出现了一种迭代连接模式,包括了大多数(0.90)的连接。我们确定了一个由 12 个运动神经元和 12 个肌肉细胞组成的重复单元。这样一个单元的运动神经元的细胞体不一定是解剖学上的邻居,也没有明显的解剖学分段。由六个重复单元组成的连接模型是对网络的一种描述,它既简化(模块化,没有非迭代连接)又完整(包括后部),比原始数据集更完整。观察到的连接的运动前框架和分段的连接模型为秀丽隐杆线虫运动的神经元基础结构研究提供了深入的见解和推进。此外,我们认为本文中使用的工具可能有助于解释、简化和表示其他运动系统的连接数据。