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真菌粗皮侧耳中的 L-氨基酸氧化酶对谷氨酸表现出底物偏好。

L-Amino acid oxidase of the fungus Hebeloma cylindrosporum displays substrate preference towards glutamate.

机构信息

Department of Food and Environmental Sciences, PO Box 56, FI-00014 University of Helsinki, Finland.

Department of Agricultural Sciences, PO Box 27, FI-00014 University of Helsinki, Finland.

出版信息

Microbiology (Reading). 2012 Jan;158(Pt 1):272-283. doi: 10.1099/mic.0.054486-0. Epub 2011 Oct 13.

Abstract

Catabolism of amino acids is a central process in cellular nitrogen turnover, but only a few of the mechanisms involved have been described from basidiomycete fungi. This study identified one such mechanism, the l-amino acid oxidase (Lao1) enzyme of Hebeloma cylindrosporum, by 2D gel separation and MS. We determined genomic DNA sequences of lao1 and part of its upstream gene, a putative pyruvate decarboxylase (pdc2), and cloned the cDNA of lao1. The two genes were also identified and annotated from the genome of Laccaria bicolor. The lao1 and pdc2 gene structures were conserved between the two fungi. The intergenic region of L. bicolor possessed putative duplications not detected in H. cylindrosporum. Lao1 sequences possessed dinucleotide-binding motifs typical for flavoproteins. Lao1 was less than 23 % identical to Lao sequences described previously. Recombinant Lao1 of H. cylindrosporum was expressed in Escherichia coli, purified and refolded with SDS to gain catalytic activity. The enzyme possessed broad substrate specificity: 37 l-amino acids or derivatives served as effective substrates. The highest activities were recorded with l-glutamate, but positively charged and aromatic amino acids were also accepted. Michaelis constants for six amino acids varied from 0.5 to 6.7 mM. We have thus characterized a novel type of Lao-enzyme and its gene from the basidiomycete fungus H. cylindrosporum.

摘要

氨基酸的分解代谢是细胞氮代谢周转的一个核心过程,但仅有少数涉及的机制已在担子菌真菌中被描述。本研究通过二维凝胶分离和 MS 鉴定了一种这样的机制,即糙皮侧耳(Hebeloma cylindrosporum)中的 l-氨基酸氧化酶(Lao1)酶。我们确定了 lao1 和其上游基因部分(假定的丙酮酸脱羧酶(pdc2))的基因组 DNA 序列,并克隆了 lao1 的 cDNA。还从双色蜡蘑(Laccaria bicolor)的基因组中鉴定并注释了这两个基因。这两个基因在两种真菌中的结构都保守。双色蜡蘑的基因间区存在 H. cylindrosporum 中未检测到的假定重复。Lao1 序列具有典型黄素蛋白的二核苷酸结合基序。与以前描述的 Lao 序列相比,Lao1 序列的相似度小于 23%。来自糙皮侧耳的重组 Lao1 在大肠杆菌中表达、纯化并用 SDS 复性以获得催化活性。该酶具有广泛的底物特异性:37 种 l-氨基酸或衍生物作为有效底物。l-谷氨酸的活性最高,但带正电荷和芳香族氨基酸也被接受。六种氨基酸的米氏常数在 0.5 到 6.7 mM 之间变化。因此,我们从担子菌真菌糙皮侧耳中表征了一种新型 Lao 酶及其基因。

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