Computational and Molecular Population Genetics (CMPG) laboratory, Institute of Ecology and Evolution, University of Berne, Baltzerstrasse 6, 3012 Berne, Switzerland.
Bioinformatics. 2012 Jan 15;28(2):298-9. doi: 10.1093/bioinformatics/btr642. Epub 2011 Nov 21.
The analysis of genetic data often requires a combination of several approaches using different and sometimes incompatible programs. In order to facilitate data exchange and file conversions between population genetics programs, we introduce PGDSpider, a Java program that can read 27 different file formats and export data into 29, partially overlapping, other file formats. The PGDSpider package includes both an intuitive graphical user interface and a command-line version allowing its integration in complex data analysis pipelines.
PGDSpider is freely available under the BSD 3-Clause license on http://cmpg.unibe.ch/software/PGDSpider/.
遗传数据分析通常需要结合使用几种方法,这些方法使用不同且有时不兼容的程序。为了促进群体遗传学程序之间的数据交换和文件转换,我们引入了 PGDSpider,这是一个 Java 程序,可以读取 27 种不同的文件格式,并将数据导出到 29 种部分重叠的其他文件格式中。PGDSpider 软件包同时包含直观的图形用户界面和命令行版本,允许将其集成到复杂的数据分析管道中。
PGDSpider 根据 BSD 3-Clause 许可证免费提供,可在 http://cmpg.unibe.ch/software/PGDSpider/ 上获得。