Guangdong and Shenzhen Key Laboratory of Male Reproductive Medicine and Genetics, Institute of Urology, Peking University Shenzhen Hospital, Shenzhen PKU-HKUST Medical Center, Shenzhen, China.
PLoS One. 2011;6(11):e27062. doi: 10.1371/journal.pone.0027062. Epub 2011 Nov 16.
Due to recent leaps forward in DNA synthesis and sequencing technology, DNA manipulation has been extended to the level of whole-genome synthesis. Bacteriophages occupy a special niche in the micro-organic ecosystem and have potential as a tool for therapeutic agent. The purpose of this study was to carry out chemical synthesis of the bacteriophage G4 and the study of its infectivity.
METHODOLOGY/PRINCIPAL FINDINGS: Full-sized genomes of bacteriophage G4 molecules were completed from short overlapping synthetic oligonucleotides by direct assembly polymerase chain reaction and ligase chain reaction followed by fusion polymerase chain reaction with flanking primers. Three novel restriction endonuclease sites were introduced to distinguish the synthetic G4 from the wild type. G4 particles were recovered after electroporation into Escherichia coli and were efficient enough to infect another strain. The phage was validated by electron microscope. Specific polymerase chain reaction assay and restriction analyses of the plaques verified the accuracy of the chemical synthetic genomes.
Our results showed that the bacteriophage G4 obtained is synthetic rather than a wild type. Our study demonstrated that a phage can be synthesized and manipulated genetically according to the sequences, and can be efficient enough to infect the Escherichia coli, showing the potential use of synthetic biology in medical application.
由于近年来 DNA 合成和测序技术的飞跃发展,DNA 操作已扩展到全基因组合成的水平。噬菌体在微生物生态系统中占据特殊位置,具有作为治疗剂工具的潜力。本研究旨在进行噬菌体 G4 的化学合成及其感染性研究。
方法/主要发现:通过直接组装聚合酶链反应和连接酶链反应,然后用侧翼引物进行融合聚合酶链反应,从短的重叠合成寡核苷酸中完成全长噬菌体 G4 分子的合成。引入了三个新的限制性内切酶位点,以区分合成的 G4 与野生型。通过电穿孔将 G4 颗粒回收进入大肠杆菌,其感染效率足以感染另一种菌株。通过电子显微镜验证了噬菌体。通过特异性聚合酶链反应分析和噬菌斑的限制分析验证了化学合成基因组的准确性。
我们的结果表明,获得的噬菌体 G4 是合成的而不是野生型的。我们的研究表明,可以根据序列合成和遗传操作噬菌体,并足以有效地感染大肠杆菌,展示了合成生物学在医学应用中的潜在用途。