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Genome sequence of Sphingobium yanoikuyae XLDN2-5, an efficient carbazole-degrading strain.鞘氨醇单胞菌 XLDN2-5 的全基因组序列,这是一株高效降解咔唑的菌株。
J Bacteriol. 2011 Nov;193(22):6404-5. doi: 10.1128/JB.06050-11.
2
NCBI Reference Sequences: current status, policy and new initiatives.NCBI参考序列:当前状态、政策及新举措。
Nucleic Acids Res. 2009 Jan;37(Database issue):D32-6. doi: 10.1093/nar/gkn721. Epub 2008 Oct 16.
3
Occurrence, production, and applications of gellan: current state and perspectives.结冷胶的产生、生产及应用:现状与展望
Appl Microbiol Biotechnol. 2008 Jul;79(6):889-900. doi: 10.1007/s00253-008-1496-0. Epub 2008 May 28.
4
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒:使用德布鲁因图进行从头短读长拼接的算法》
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
5
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
6
Modeling for gellan gum production by Sphingomonas paucimobilis ATCC 31461 in a simplified medium.少动鞘氨醇单胞菌ATCC 31461在简化培养基中生产结冷胶的建模
Appl Environ Microbiol. 2006 May;72(5):3367-74. doi: 10.1128/AEM.72.5.3367-3374.2006.
7
Organization of genes required for gellan polysaccharide biosynthesis in Sphingomonas elodea ATCC 31461.鞘氨醇单胞菌ATCC 31461中结冷胶多糖生物合成所需基因的组织
J Ind Microbiol Biotechnol. 2004 Feb;31(2):70-82. doi: 10.1007/s10295-004-0118-9. Epub 2004 Feb 6.
8
Characterization of the ugpG gene encoding a UDP-glucose pyrophosphorylase from the gellan gum producer Sphingomonas paucimobilis ATCC 31461.对来自结冷胶生产菌少动鞘氨醇单胞菌ATCC 31461的编码UDP-葡萄糖焦磷酸化酶的ugpG基因的表征。
Mol Genet Genomics. 2003 Mar;268(6):816-24. doi: 10.1007/s00438-003-0805-7. Epub 2003 Feb 26.
9
Gellan gum biosynthesis in Sphingomonas paucimobilis ATCC 31461: genes, enzymes and exopolysaccharide production engineering.少动鞘氨醇单胞菌ATCC 31461中结冷胶的生物合成:基因、酶与胞外多糖生产工程
J Ind Microbiol Biotechnol. 2002 Oct;29(4):170-6. doi: 10.1038/sj.jim.7000266.
10
Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses.基于系统发育和化学分类分析提出狭义鞘氨醇单胞菌属及三个新属,即鞘氨醇杆菌属、新鞘氨醇单胞菌属和鞘氨醇盒菌属。
Int J Syst Evol Microbiol. 2001 Jul;51(Pt 4):1405-17. doi: 10.1099/00207713-51-4-1405.

黄单胞菌属 elodea ATCC 31461 基因组序列,该菌是生产胶凝多糖的高效工业菌株。

Genome sequence of Sphingomonas elodea ATCC 31461, a highly productive industrial strain of gellan gum.

机构信息

State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, People’s Republic of China.

出版信息

J Bacteriol. 2011 Dec;193(24):7015-6. doi: 10.1128/JB.06307-11.

DOI:10.1128/JB.06307-11
PMID:22123766
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3232862/
Abstract

The commercial gelling agent gellan gum is a heteropolysaccharide produced by Sphingomonas elodea ATCC 31461. However, the genes involved in the biosynthesis, regulation, and modification of gellan gum have not been fully characterized. Here we describe the draft genome sequence of stain ATCC 31461 and major findings from its annotation.

摘要

商业用胶凝剂结冷胶是由鞘氨醇单胞菌(Sphingomonas elodea)ATCC 31461 产生的一种杂多糖。然而,参与结冷胶生物合成、调控和修饰的基因尚未得到充分的描述。本文介绍了菌株 ATCC 31461 的基因组序列草图及其注释的主要发现。