Korean Agricultural Culture Collection (KACC), National Academy of Agricultural Science, Rural Development Administration, Suwon, Republic of Korea.
NITE Biological Resource Center (NBRC), National Institute of Technology and Evaluation, 2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan.
Int J Syst Evol Microbiol. 2012 Oct;62(Pt 10):2410-2416. doi: 10.1099/ijs.0.036343-0. Epub 2011 Nov 25.
A Gram-positive, aerobic, non-motile, short rod, designated SMC46(T), was isolated from a spent mushroom compost sample collected in the Suwon region, South Korea. 16S rRNA gene sequence analysis revealed that strain SMC46(T) was a member of the family Microbacteriaceae; however, the isolate formed a branch separate from other genera within the family. Sequence similarity between strain SMC46(T) and other members of the family Microbacteriaceae was ≤97 %, the highest sequence similarity being with Frigoribacterium faeni 801(T) and Frondihabitans australicus E1HC-02(T) (both 97.0 %). Some chemotaxonomic properties of strain SMC46(T) were consistent with those of the family Microbacteriaceae: MK-11 and MK-12 as the predominant menaquinones, anteiso-C(15 : 0), iso-C(16 : 0) and anteiso-C(17 : 0) as the major cellular fatty acids and diphosphatidylglycerol, phosphatidylglycerol and an unidentified glycolipid as the polar lipids. However, strain SMC46(T) contained a B-type peptidoglycan not previously found in the family Microbacteriaceae. The DNA G+C content was 68 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic distinctiveness, strain SMC46(T) was considered to represent a novel genus and species in the family Microbacteriaceae, for which the name Compostimonas suwonensis gen. nov., sp. nov. is proposed. The type strain of the type species is SMC46(T) ( = KACC 13354(T) = NBRC 106304(T)).
一株革兰氏阳性、需氧、不运动的短杆状细菌,被命名为 SMC46(T),从韩国水原地区的废弃蘑菇堆肥样本中分离得到。16S rRNA 基因序列分析表明,菌株 SMC46(T)是微杆菌科的一员;然而,该分离株与该科内的其他属形成了一个分支。与微杆菌科的其他成员相比,菌株 SMC46(T)的序列相似度≤97%,与 Frigoribacterium faeni 801(T)和 Frondihabitans australicus E1HC-02(T)的相似度最高(均为 97.0%)。菌株 SMC46(T)的一些化学分类特征与微杆菌科一致:MK-11 和 MK-12 为主要的menaquinones,anteiso-C(15:0)、iso-C(16:0)和 anteiso-C(17:0)为主要的细胞脂肪酸,二磷脂酰甘油、磷脂酰甘油和一种未鉴定的糖脂为极性脂。然而,菌株 SMC46(T)含有一种以前未在微杆菌科中发现的 B 型肽聚糖。DNA G+C 含量为 68 mol%。基于表型、化学分类和系统发育的独特性,菌株 SMC46(T)被认为代表了微杆菌科中的一个新属和新种,因此建议将其命名为 Compostimonas suwonensis gen. nov.,sp. nov.。该模式种的模式菌株为 SMC46(T)(=KACC 13354(T)=NBRC 106304(T))。