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本文引用的文献

1
Automated prediction of protein association rate constants.蛋白质缔合速率常数的自动预测。
Structure. 2011 Dec 7;19(12):1744-51. doi: 10.1016/j.str.2011.10.015.
2
Theory and simulation of diffusion-influenced, stochastically gated ligand binding to buried sites.扩散影响的理论和模拟,随机门控配体与埋藏部位结合。
J Chem Phys. 2011 Oct 14;135(14):145101. doi: 10.1063/1.3645000.
3
How do dynamic cellular signals travel long distances?动态细胞信号是如何远距离传播的?
Mol Biosyst. 2012 Jan;8(1):22-6. doi: 10.1039/c1mb05205e. Epub 2011 Jul 18.
4
Intrinsically disordered proteins: regulation and disease.无规则卷曲蛋白质:调控与疾病
Curr Opin Struct Biol. 2011 Jun;21(3):432-40. doi: 10.1016/j.sbi.2011.03.011. Epub 2011 Apr 20.
5
Toward a quantitative theory of intrinsically disordered proteins and their function.迈向无规卷曲蛋白质及其功能的定量理论。
Proc Natl Acad Sci U S A. 2009 Nov 24;106(47):19819-23. doi: 10.1073/pnas.0907710106. Epub 2009 Nov 10.
6
Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism.内在无序蛋白质在耦合折叠-结合过程中的动力学优势:对“抛锚式”机制的批判性评估。
J Mol Biol. 2009 Nov 13;393(5):1143-59. doi: 10.1016/j.jmb.2009.09.010. Epub 2009 Sep 10.
7
Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity.内在蛋白质无序和相互作用混杂与剂量敏感性广泛相关。
Cell. 2009 Jul 10;138(1):198-208. doi: 10.1016/j.cell.2009.04.029.
8
Theory of free energy and entropy in noncovalent binding.非共价键结合中的自由能与熵理论
Chem Rev. 2009 Sep;109(9):4092-107. doi: 10.1021/cr800551w.
9
Intrinsically disordered p53 extreme C-terminus binds to S100B(betabeta) through "fly-casting".内在无序的p53极端C末端通过“抛锚式”与S100B(ββ)结合。
J Am Chem Soc. 2009 Feb 18;131(6):2088-9. doi: 10.1021/ja809547p.
10
Fundamental aspects of protein-protein association kinetics.蛋白质-蛋白质结合动力学的基本方面。
Chem Rev. 2009 Mar 11;109(3):839-60. doi: 10.1021/cr800373w.

固有无序:通过高度特异性但短暂的关联进行信号传递。

Intrinsic disorder: signaling via highly specific but short-lived association.

机构信息

Department of Physics and Institute of Molecular Biophysics, Florida State University, Tallahassee, FL 32306, USA.

出版信息

Trends Biochem Sci. 2012 Feb;37(2):43-8. doi: 10.1016/j.tibs.2011.11.002. Epub 2011 Dec 7.

DOI:10.1016/j.tibs.2011.11.002
PMID:22154231
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3278522/
Abstract

Association between signaling proteins and their cellular targets is generally thought to be highly specific (implicating a high association constant, K(a)) and, at the same time, transient or short-lived (corresponding to a high dissociation rate constant, k(d)). However, a combination of high K(a) and high k(d) would lead to a high association rate constant (k(a) = K(a)k(d)), which poses a problem because there is a limit to which k(a) can be increased, set by the diffusional approach to form the complex. In this Opinion article, I propose that having the signaling protein disordered before binding to the target provides a way out of this quandary. The intrinsic disorder of the signaling protein would decrease K(a) without sacrificing the specificity of the complex, and thus would allow k(d) to be increased to a range appropriate for signaling.

摘要

信号蛋白与其细胞靶标的结合通常被认为是高度特异的(暗示着高的结合常数,K(a)),同时也是短暂或短暂的(对应于高的离解速率常数,k(d))。然而,高 K(a)和高 k(d)的组合将导致高的结合速率常数(k(a) = K(a)k(d)),这是一个问题,因为 k(a)的增加受到限制,这是由形成复合物的扩散方法决定的。在这篇观点文章中,我提出,在与靶标结合之前使信号蛋白无序,为解决这一困境提供了一种方法。信号蛋白的固有无序性会降低 K(a),而不会牺牲复合物的特异性,从而使 k(d)增加到适合信号传递的范围。