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利用膜蛋白纳米晶体和微晶进行结构测定。

Toward structure determination using membrane-protein nanocrystals and microcrystals.

机构信息

Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ 85287, USA.

出版信息

Methods. 2011 Dec;55(4):387-404. doi: 10.1016/j.ymeth.2011.12.006. Epub 2011 Dec 22.

Abstract

Membrane proteins are very important for all living cells, being involved in respiration, photosynthesis, cellular uptake and signal transduction, amongst other vital functions. However, less than 300 unique membrane protein structures have been determined to date, often due to difficulties associated with the growth of sufficiently large and well-ordered crystals. This work has been focused on showing the first proof of concept for using membrane protein nanocrystals and microcrystals for high-resolution structure determination. Upon determining that crystals of the membrane protein Photosystem I, which is the largest and most complex membrane protein crystallized to date, exist with only 100 unit cells with sizes of less than 200 nm on an edge, work was done to develop a technique that could exploit the growth of the Photosystem I nanocrystals and microcrystals. Femtosecond X-ray protein nanocrystallography was developed for use at the first high-energy X-ray free electron laser, the LCLS at SLAC National Accelerator Laboratory, in which a liquid jet brought fully-hydrated Photosystem I nanocrystals into the interaction region of the pulsed X-ray source. Diffraction patterns were recorded from millions of individual PSI nanocrystals and data from thousands of different, randomly oriented crystallites were integrated using Monte Carlo integration of the peak intensities. The short pulses (∼70fs) provided by the LCLS allowed the possibility to collect the diffraction data before the onset of radiation damage, exploiting the diffract-before-destroy principle. During the initial experiments at the AMO beamline using 6.9-Å wavelength, Bragg peaks were recorded to 8.5-Å resolution, and an electron-density map was determined that did not show any effects of X-ray-induced radiation damage [94]. Many additional techniques still need to be developed to explore the femtosecond nanocrystallography technique for experimental phasing and time-resolved X-ray crystallography experiments. The first proof-of-principle results for the femtosecond nanocrystallography technique indicate the incredible potential of the technique to offer a new route to the structure determination of membrane proteins.

摘要

膜蛋白对于所有活细胞都非常重要,它们参与呼吸、光合作用、细胞摄取和信号转导等重要功能。然而,迄今为止,只有不到 300 种独特的膜蛋白结构被确定,这通常是由于与生长足够大和有序的晶体相关的困难。这项工作的重点是展示使用膜蛋白纳米晶体和微晶进行高分辨率结构测定的第一个概念验证。在确定迄今为止结晶的最大和最复杂的膜蛋白 Photosystem I 的晶体仅存在于小于 200nm 的边缘的 100 个单元细胞中之后,就开始研究一种可以利用 Photosystem I 纳米晶体和微晶生长的技术。飞秒 X 射线蛋白纳米晶体学是为在第一个高能 X 射线自由电子激光 LCLS 上使用而开发的,该激光位于 SLAC 国家加速器实验室,其中液体射流将完全水合的 Photosystem I 纳米晶体带入脉冲 X 射线源的相互作用区域。从数百万个单独的 PSI 纳米晶体记录衍射图案,并使用蒙特卡罗积分对峰强度进行积分,从数千个不同的、随机取向的微晶中集成数据。LCLS 提供的短脉冲(约 70fs)允许在辐射损伤开始之前收集衍射数据,利用衍射先破坏原理。在 AMO 光束线使用 6.9-Å 波长进行的初始实验中,记录到 Bragg 峰至 8.5-Å 分辨率,并确定了一个没有显示任何 X 射线诱导辐射损伤影响的电子密度图[94]。仍需要开发许多其他技术来探索飞秒纳米晶体学技术在实验相分析和时间分辨 X 射线晶体学实验中的应用。飞秒纳米晶体学技术的第一个原理验证结果表明,该技术具有提供膜蛋白结构测定的新途径的巨大潜力。

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