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芳香噬烷菌属,新属,一种从海洋甲藻腰鞭毛藻的培养物中分离出的芳香烃降解菌,并提出 Algiphilaceae 科新属。

Algiphilus aromaticivorans gen. nov., sp. nov., an aromatic hydrocarbon-degrading bacterium isolated from a culture of the marine dinoflagellate Lingulodinium polyedrum, and proposal of Algiphilaceae fam. nov.

机构信息

School of Life Sciences, Heriot-Watt University, Edinburgh EH14 4AS, UK.

Lancaster University, Lancaster Environment Centre, Lancaster LA1 4YQ, UK.

出版信息

Int J Syst Evol Microbiol. 2012 Nov;62(Pt 11):2743-2749. doi: 10.1099/ijs.0.033324-0. Epub 2012 Jan 6.

DOI:10.1099/ijs.0.033324-0
PMID:22228670
Abstract

A strictly aerobic, halotolerant, Gram-stain-negative, rod-shaped bacterium, designated strain DG1253(T), was isolated from a laboratory culture of the marine dinoflagellate Lingulodinium polyedrum (CCAP 1121/2). The strain was able to degrade two- and three-ring polycyclic aromatic hydrocarbons. It exhibited a narrow nutritional spectrum, preferring to utilize aliphatic and aromatic hydrocarbon compounds and small organic acids. Cells produced surface blebs and contained a single polar flagellum. The predominant isoprenoid quinone of strain DG1253(T) was Q-8. The fatty acid profile was dominated by C(18:1)ω7c. The mean DNA G+C content of strain DG1253(T) was 63.6 ± 0.25 mol%. 16S rRNA gene sequence analysis placed this organism within the order Xanthomonadales of the class Gammaproteobacteria. Its closest relatives included representatives of the Hydrocarboniphaga-Nevskia-Sinobacter clade (≤ 89.9% 16S rRNA gene sequence similarity) in the family Sinobacteraceae. On the basis of distinct phenotypic and genotypic characteristics, strain DG1253(T) is considered to represent a novel species of a new genus in the class Gammaproteobacteria, for which the name Algiphilus aromaticivorans gen. nov., sp. nov. is proposed. The type strain of the type species, Algiphilus aromaticivorans, is DG1253(T) (=ATCC BAA-2243(T)=DSM 24793(T)). In addition, a new family, Algiphilaceae fam. nov., is proposed to accommodate the genus Algiphilus.

摘要

一株严格需氧、耐盐、革兰氏阴性、杆状的细菌,被命名为 DG1253(T) 菌株,从海洋甲藻(Lingulodinium polyedrum (CCAP 1121/2)的实验室培养物中分离得到。该菌株能够降解双环和三环多环芳烃。它表现出狭窄的营养谱,优先利用脂肪族和芳香族烃化合物和小分子有机酸。细胞产生表面泡囊,并含有单个极生鞭毛。DG1253(T) 菌株的主要类异戊二烯醌是 Q-8。脂肪酸图谱以 C(18:1)ω7c 为主。DG1253(T) 菌株的平均 DNA G+C 含量为 63.6 ± 0.25 mol%。16S rRNA 基因序列分析将该生物归入γ-变形杆菌纲的黄单胞菌目。其最接近的亲缘关系包括在 Sinobacteraceae 科的 Hydrocarboniphaga-Nevskia-Sinobacter 分支(≤ 89.9% 16S rRNA 基因序列相似性)的代表。根据明显的表型和基因型特征,DG1253(T) 菌株被认为代表了一个新的属,属于γ-变形杆菌纲,建议将其命名为Algiphilus aromaticivorans gen. nov.,sp. nov.。模式种的模式菌株为 Algiphilus aromaticivorans,即 DG1253(T) (=ATCC BAA-2243(T)=DSM 24793(T))。此外,还提出了一个新的科,Algiphilaceae fam. nov.,以容纳 Algiphilus 属。

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