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设计金属蛋白中的水解催化和结构稳定

Hydrolytic catalysis and structural stabilization in a designed metalloprotein.

机构信息

Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, USA.

出版信息

Nat Chem. 2011 Nov 27;4(2):118-23. doi: 10.1038/nchem.1201.

Abstract

Metal ions are an important part of many natural proteins, providing structural, catalytic and electron transfer functions. Reproducing these functions in a designed protein is the ultimate challenge to our understanding of them. Here, we present an artificial metallohydrolase, which has been shown by X-ray crystallography to contain two different metal ions-a Zn(II) ion, which is important for catalytic activity, and a Hg(II) ion, which provides structural stability. This metallohydrolase displays catalytic activity that compares well with several characteristic reactions of natural enzymes. It catalyses p-nitrophenyl acetate (pNPA) hydrolysis with an efficiency only ~100-fold less than that of human carbonic anhydrase (CA)II and at least 550-fold better than comparable synthetic complexes. Similarly, CO(2) hydration occurs with an efficiency within ~500-fold of CAII. Although histidine residues in the absence of Zn(II) exhibit pNPA hydrolysis, miniscule apopeptide activity is observed for CO(2) hydration. The kinetic and structural analysis of this first de novo designed hydrolytic metalloenzyme reveals necessary design features for future metalloenzymes containing one or more metals.

摘要

金属离子是许多天然蛋白质的重要组成部分,提供结构、催化和电子转移功能。在设计的蛋白质中重现这些功能是对我们理解它们的终极挑战。在这里,我们展示了一种人工金属水解酶,通过 X 射线晶体学显示它含有两种不同的金属离子 - 一个 Zn(II) 离子,它对催化活性很重要,另一个 Hg(II) 离子,它提供结构稳定性。这种金属水解酶表现出的催化活性与几种天然酶的特征反应相当。它催化对硝基苯乙酸酯(pNPA)水解的效率仅比人碳酸酐酶(CA)II 低约 100 倍,比可比的合成配合物至少高 550 倍。同样,CO(2)水合的效率与 CAII 相差约 500 倍。虽然没有 Zn(II)的组氨酸残基表现出对 pNPA 的水解,但对 CO(2)水合的最小脱肽活性也有观察到。对这种首次从头设计的水解金属酶的动力学和结构分析揭示了未来含有一个或多个金属的金属酶的必要设计特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b36/3270697/53e976b5d084/nihms332758f1.jpg

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