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水动力学与生物分子相互作用和热力学状态变化的关系:中子散射研究。

Water dynamics as affected by interaction with biomolecules and change of thermodynamic state: a neutron scattering study.

机构信息

Dipartimento di Fisica, Università di Perugia, I-06123 Perugia, Italy.

出版信息

J Phys Condens Matter. 2012 Feb 15;24(6):064105. doi: 10.1088/0953-8984/24/6/064105. Epub 2012 Jan 25.

DOI:10.1088/0953-8984/24/6/064105
PMID:22277348
Abstract

The dynamics of water as subtly perturbed by both the interaction with biomolecules and the variation of temperature and pressure has been investigated via neutron scattering spectroscopy. A measurement of inelastic neutron scattering devoted to the study of the coherent THz dynamics of water in a water-rich mixture with DNA (hydration level of 1 g DNA/15 g D(2)O) at room temperature is reported. The DNA hydration water coherent dynamics is characterised by the presence of collective modes, whose dispersion relations are similar to those observed in bulk water. These dispersion relations are well described by the interaction model developed in the case of bulk water, and the existence of a fast sound is experimentally demonstrated. The behaviour of the collective water dynamics was complemented by studying the single-particle dynamics of bulk water along the isotherm T = 298 K in the pressure range 0.1-350 MPa by means of incoherent scattering. This experiment is an attempt to simulate the change of the water molecular arrangement due to the interaction with DNA, by increasing the pressure as the presence of the biomolecule produces an increase in the density. An anomaly is found in the behaviour of the relaxation time derived from the quasi-elastic scattering signal, which can be related to the hypothetical second critical point in water. This anomaly and the transition from slow to fast sound take place in the same Q range, thus suggesting that the two phenomena could be related at some microscopic level.

摘要

通过中子散射光谱学研究了水在与生物分子相互作用以及温度和压力变化的微妙扰动下的动力学。本文报道了一项弹性中子散射测量研究,该研究旨在研究富含 DNA 的水混合物(水合水平为 1g DNA/15gD2O)中室温下水的相干太赫兹动力学。DNA 水合水的相干动力学的特征在于存在集体模式,其色散关系与在本体水中观察到的相似。这些色散关系很好地描述了在本体水中发展的相互作用模型,并且实验证明了快声的存在。通过在温度为 298K 的等温线上在 0.1-350MPa 的压力范围内进行非弹性散射,研究了集体水动力学的行为,从而补充了对本体水单粒子动力学的研究。该实验试图通过增加压力来模拟由于与 DNA 的相互作用而导致的水分子排列的变化,因为生物分子的存在会增加密度。在从准弹性散射信号得出的弛豫时间的行为中发现了一个异常,这可能与水中的假设第二临界点有关。这种异常和从慢声到快声的转变发生在相同的 Q 范围内,因此表明这两种现象可能在微观水平上存在某种关系。

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