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DNA 水合水的玻璃态特性。

Glassy character of DNA hydration water.

机构信息

Dipartimento di Fisica, Università degli Studi di Perugia, Via Pascoli I-06123 Perugia, Italy.

出版信息

J Phys Chem B. 2013 Feb 21;117(7):2026-31. doi: 10.1021/jp3105437. Epub 2013 Feb 8.

Abstract

The coherent excitations of DNA hydration water at 100 K have been investigated by neutron scattering spectroscopy to extract the excess signal of D(2)O-hydrated DNA with respect to dry DNA samples. A structural characterization of the sample, through the analysis of the static structure factor, has suggested that DNA hydration water is largely in an amorphous state up to high hydration degree, with only a small contribution coming from slightly deformed crystalline ice. To describe the inelastic spectra of DNA hydration water, we exploited a phenomenological model already applied in similar disordered systems, such as bulk water (Sacchetti et al. Phys. Rev. E2004, 69, 061203; Petrillo et al. Phys. Rev. E2000, 62, 3611-3618; Sette et al. Phys. Rev. Lett.1996, 77, 83-86) and protein hydration water (Orecchini et al. J. Am. Chem. Soc.2009, 131, 4664-4669). Over the low-energy range, the coherent dynamics of DNA hydration water is characterized by a branch at about 7.5 meV, a value slightly larger than that of bulk water. An additional mode in the energy range 20-35 meV is found, with a wavevector dependence seemingly connected with the structural features of amorphous ice. The ensemble of the results supports the glassy nature of DNA hydration water.

摘要

我们通过中子散射光谱研究了 100 K 时 DNA 水合水的相干激发,以提取相对于干 DNA 样品的 D(2)O 水合 DNA 的过剩信号。通过静态结构因子的分析对样品进行结构表征,表明 DNA 水合水在高水合度下主要处于无定形态,只有一小部分来自略微变形的结晶冰。为了描述 DNA 水合水的非弹性光谱,我们利用了已在类似无序系统(如体相水(Sacchetti 等人,Phys. Rev. E2004,69,061203;Petrillo 等人,Phys. Rev. E2000,62,3611-3618;Sette 等人,Phys. Rev. Lett.1996,77,83-86)和蛋白质水合水(Orecchini 等人,J. Am. Chem. Soc.2009,131,4664-4669)中应用的唯象模型。在低能范围内,DNA 水合水的相干动力学由大约 7.5 meV 的支带特征化,该值略大于体相水的值。在 20-35 meV 的能量范围内发现了另一个模式,其波矢依赖性似乎与无定形冰的结构特征有关。结果的总体情况支持 DNA 水合水的玻璃态性质。

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