Institute of Theoretical Physics, Georg-August-Universität Göttingen, Friedrich-Hund-Platz 1, 37077 Göttingen, Germany.
J Chem Phys. 2012 Jan 21;136(3):035102. doi: 10.1063/1.3675832.
We consider a biopolymer bundle consisting of filaments that are cross-linked together. The cross-links are reversible: they can dynamically bind and unbind adjacent filament pairs as controlled by a binding enthalpy. The bundle is subjected to a bending deformation and the corresponding distribution of cross-links is measured. For a bundle consisting of two filaments, upon increasing the bending amplitude, a first-order transition is observed. The transition is from a state where the filaments are tightly coupled by many bound cross-links, to a state of nearly independent filaments with only a few bound cross-links. For a bundle consisting of more than two filaments, a series of first-order transitions is observed. The transitions are connected with the formation of an interface between regions of low and high cross-link densities. Combining umbrella sampling Monte Carlo simulations with analytical calculations, we present a detailed picture of how the competition between cross-link shearing and filament stretching drives the transitions. We also find that, when the cross-links become soft, collective behavior is not observed: the cross-links then unbind one after the other leading to a smooth decrease of the average cross-link density.
我们考虑了由相互交联的细丝组成的生物聚合物束。交联是可逆的:它们可以根据结合焓动态地结合和解离相邻的细丝对。该束受到弯曲变形,并且测量相应的交联分布。对于由两根细丝组成的束,随着弯曲幅度的增加,观察到一级相变。该相变是从细丝通过许多结合交联紧密耦合的状态,到只有少数结合交联的几乎独立细丝的状态。对于由超过两根细丝组成的束,观察到一系列一级相变。这些转变与低交联密度区域和高交联密度区域之间形成界面有关。通过伞状采样蒙特卡罗模拟与分析计算相结合,我们展示了交联剪切和细丝拉伸之间的竞争如何驱动这些转变的详细情况。我们还发现,当交联变软时,不会观察到集体行为:交联随后一个接一个地解开,导致平均交联密度的平滑下降。