• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

体外研究表明,组蛋白密度在由染色质重塑因子 RSC 和组蛋白伴侣 NAP1 介导的转录过程中得以维持。

Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.

机构信息

David Geffen School of Medicine, Department of Biological Chemistry, 615 Charles E. Young Drive, University of California, Los Angeles, CA 90095-1737, USA.

出版信息

Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):1931-6. doi: 10.1073/pnas.1109994109. Epub 2012 Jan 23.

DOI:10.1073/pnas.1109994109
PMID:22308335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3277555/
Abstract

ATPases and histone chaperones facilitate RNA polymerase II (pol II) elongation on chromatin. In vivo, the coordinated action of these enzymes is necessary to permit pol II passage through a nucleosome while restoring histone density afterward. We have developed a biochemical system recapitulating this basic process. Transcription through a nucleosome in vitro requires the ATPase remodels structure of chromatin (RSC) and the histone chaperone nucleosome assembly protein 1 (NAP1). In the presence of NAP1, RSC generates a hexasome. Despite the propensity of RSC to evict histones, NAP1 reprograms the reaction such that the hexasome is retained on the template during multiple rounds of transcription. This work has implications toward understanding the mechanism of pol II elongation on chromatin.

摘要

ATP 酶和组蛋白伴侣促进 RNA 聚合酶 II(pol II)在染色质上的延伸。在体内,这些酶的协调作用对于允许 pol II 通过核小体并在之后恢复组蛋白密度是必要的。我们已经开发了一种生化系统来重现这个基本过程。体外转录通过核小体需要 ATP 酶重塑染色质结构(RSC)和组蛋白伴侣核小体组装蛋白 1(NAP1)。在 NAP1 的存在下,RSC 生成六聚体。尽管 RSC 有驱逐组蛋白的倾向,但 NAP1 重新编程反应,使得六聚体在多个转录循环中保留在模板上。这项工作对于理解 pol II 在染色质上的延伸机制具有重要意义。

相似文献

1
Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.体外研究表明,组蛋白密度在由染色质重塑因子 RSC 和组蛋白伴侣 NAP1 介导的转录过程中得以维持。
Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):1931-6. doi: 10.1073/pnas.1109994109. Epub 2012 Jan 23.
2
Coordinated Action of Nap1 and RSC in Disassembly of Tandem Nucleosomes.Nap1和RSC在串联核小体解聚中的协同作用。
Mol Cell Biol. 2016 Aug 12;36(17):2262-71. doi: 10.1128/MCB.00195-16. Print 2016 Sep 1.
3
The synergy between RSC, Nap1 and adjacent nucleosome in nucleosome remodeling.核小体重塑中 RSC、Nap1 和相邻核小体之间的协同作用。
Biochim Biophys Acta Gene Regul Mech. 2019 Feb;1862(2):129-140. doi: 10.1016/j.bbagrm.2018.11.008. Epub 2018 Dec 26.
4
Nap1 links transcription elongation, chromatin assembly, and messenger RNP complex biogenesis.核仁磷酸蛋白1(Nap1)连接转录延伸、染色质组装和信使核糖核蛋白复合物生物发生。
Mol Cell Biol. 2008 Apr;28(7):2113-24. doi: 10.1128/MCB.02136-07. Epub 2008 Jan 28.
5
RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation.RSC利用组蛋白乙酰化来消除核小体对RNA聚合酶II延伸的阻碍。
Mol Cell. 2006 Nov 3;24(3):481-7. doi: 10.1016/j.molcel.2006.09.012.
6
Histone chaperones Nap1 and Vps75 regulate histone acetylation during transcription elongation.组蛋白伴侣 Nap1 和 Vps75 在转录延伸过程中调节组蛋白乙酰化。
Mol Cell Biol. 2013 Apr;33(8):1645-56. doi: 10.1128/MCB.01121-12. Epub 2013 Feb 11.
7
The RSC complex localizes to coding sequences to regulate Pol II and histone occupancy.RSC 复合物定位于编码序列以调节 Pol II 和组蛋白占有率。
Mol Cell. 2014 Dec 4;56(5):653-66. doi: 10.1016/j.molcel.2014.10.002. Epub 2014 Nov 6.
8
Histone Acetylation Inhibits RSC and Stabilizes the +1 Nucleosome.组蛋白乙酰化抑制 RSC 并稳定+1 核小体。
Mol Cell. 2018 Nov 1;72(3):594-600.e2. doi: 10.1016/j.molcel.2018.09.030. Epub 2018 Oct 25.
9
Chaperone Nap1 shields histone surfaces used in a nucleosome and can put H2A-H2B in an unconventional tetrameric form.伴侣蛋白 Nap1 保护核小体中使用的组蛋白表面,并能使 H2A-H2B 形成非传统的四聚体形式。
Mol Cell. 2013 Sep 12;51(5):662-77. doi: 10.1016/j.molcel.2013.07.015. Epub 2013 Aug 22.
10
Genome-wide regulation of Pol II, FACT, and Spt6 occupancies by RSC in Saccharomyces cerevisiae.酿酒酵母中 RSC 对 Pol II、FACT 和 Spt6 占据的全基因组调控。
Gene. 2024 Jan 30;893:147959. doi: 10.1016/j.gene.2023.147959. Epub 2023 Nov 3.

引用本文的文献

1
Roles of histone chaperone Nap1 and histone acetylation in regulating phase-separation of chromatin arrays.组蛋白伴侣Nap1和组蛋白乙酰化在调节染色质阵列相分离中的作用。
bioRxiv. 2025 May 15:2025.05.09.653121. doi: 10.1101/2025.05.09.653121.
2
Somatic NAP1L1 p.D349E promotes cardiac hypertrophy through cGAS-STING-IFN signaling.体细胞NAP1L1 p.D349E通过cGAS-STING-IFN信号通路促进心肌肥大。
Nat Commun. 2025 Apr 1;16(1):3140. doi: 10.1038/s41467-025-58453-7.
3
Structural Transition of the Nucleosome during Transcription Elongation.核小体在转录延伸过程中的结构转变。
Cells. 2023 May 14;12(10):1388. doi: 10.3390/cells12101388.
4
A hexasome is the preferred substrate for the INO80 chromatin remodeling complex, allowing versatility of function.六聚体是 INO80 染色质重塑复合物的首选底物,使其具有多功能性。
Mol Cell. 2022 Jun 2;82(11):2098-2112.e4. doi: 10.1016/j.molcel.2022.04.026. Epub 2022 May 20.
5
Synthesis of Oriented Hexasomes and Asymmetric Nucleosomes Using a Template Editing Process.使用模板编辑过程合成定向六方体和不对称核小体。
J Am Chem Soc. 2022 Feb 9;144(5):2284-2291. doi: 10.1021/jacs.1c12420. Epub 2022 Jan 26.
6
Collaboration through chromatin: motors of transcription and chromatin structure.通过染色质协作:转录和染色质结构的动力。
J Mol Biol. 2021 Jul 9;433(14):166876. doi: 10.1016/j.jmb.2021.166876. Epub 2021 Feb 5.
7
On the role of transcription in positioning nucleosomes.关于转录在核小体定位中的作用。
PLoS Comput Biol. 2021 Jan 8;17(1):e1008556. doi: 10.1371/journal.pcbi.1008556. eCollection 2021 Jan.
8
Nucleosome Dynamics during Transcription Elongation.核小体在转录延伸过程中的动力学。
ACS Chem Biol. 2020 Dec 18;15(12):3133-3142. doi: 10.1021/acschembio.0c00617. Epub 2020 Dec 2.
9
The role of FACT in managing chromatin: disruption, assembly, or repair?FACT 在调控染色质中的作用:是破坏、组装还是修复?
Nucleic Acids Res. 2020 Dec 2;48(21):11929-11941. doi: 10.1093/nar/gkaa912.
10
Cockayne syndrome B protein acts as an ATP-dependent processivity factor that helps RNA polymerase II overcome nucleosome barriers. Cockayne 综合征 B 蛋白作为一种 ATP 依赖性持续合成因子,帮助 RNA 聚合酶 II 克服核小体障碍。
Proc Natl Acad Sci U S A. 2020 Oct 13;117(41):25486-25493. doi: 10.1073/pnas.2013379117. Epub 2020 Sep 28.

本文引用的文献

1
Chromatin-dependent binding of the S. cerevisiae HMGB protein Nhp6A affects nucleosome dynamics and transcription.酿酒酵母 HMGB 蛋白 Nhp6A 依赖染色质的结合影响核小体动力学和转录。
Genes Dev. 2010 Sep 15;24(18):2031-42. doi: 10.1101/gad.1948910.
2
BRG1 helps RNA polymerase II to overcome a nucleosomal barrier during elongation, in vivo.BRG1 有助于 RNA 聚合酶 II 在体内延伸过程中克服核小体障碍。
EMBO Rep. 2010 Oct;11(10):751-7. doi: 10.1038/embor.2010.131. Epub 2010 Sep 10.
3
A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding.RSC/nucleosome 复合物决定染色质结构,并促进激活剂结合。
Cell. 2010 Apr 30;141(3):407-18. doi: 10.1016/j.cell.2010.03.048.
4
The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions.组蛋白伴侣 Nap1 通过消除非核小体组蛋白 DNA 相互作用来促进核小体组装。
Mol Cell. 2010 Mar 26;37(6):834-42. doi: 10.1016/j.molcel.2010.01.037.
5
Progression through the RNA polymerase II CTD cycle.通过RNA聚合酶II C末端结构域循环的进程。
Mol Cell. 2009 Nov 25;36(4):541-6. doi: 10.1016/j.molcel.2009.10.019.
6
Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II.RNA聚合酶II通过过程中染色质重塑与恢复的机制。
Nat Struct Mol Biol. 2009 Dec;16(12):1272-8. doi: 10.1038/nsmb.1689. Epub 2009 Nov 22.
7
Histone chaperone spt16 promotes redeposition of the original h3-h4 histones evicted by elongating RNA polymerase.组蛋白伴侣spt16促进被延伸的RNA聚合酶驱逐的原始H3-H4组蛋白的重新沉积。
Mol Cell. 2009 Aug 14;35(3):377-83. doi: 10.1016/j.molcel.2009.07.001.
8
The biology of chromatin remodeling complexes.染色质重塑复合物的生物学
Annu Rev Biochem. 2009;78:273-304. doi: 10.1146/annurev.biochem.77.062706.153223.
9
A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome.酿酒酵母基因组中转录机制及其调控因子的典型启动子组织。
Genome Res. 2009 Mar;19(3):360-71. doi: 10.1101/gr.084970.108. Epub 2009 Jan 5.
10
The double bromodomain proteins Brd2 and Brd3 couple histone acetylation to transcription.双溴结构域蛋白Brd2和Brd3将组蛋白乙酰化与转录联系起来。
Mol Cell. 2008 Apr 11;30(1):51-60. doi: 10.1016/j.molcel.2008.01.018.