Dipartimento di Chimica, Università di Firenze, Via della Lastruccia 3, Sesto Fiorentino, Florence, Italy.
J Inorg Biochem. 2012 Jun;111:203-9. doi: 10.1016/j.jinorgbio.2012.01.011. Epub 2012 Jan 31.
The crystal structure of a blue laccase from Steccherinum ochraceum has been solved at 2.0Å of resolution using a classic data acquisition from a single crystal. The overall structural features are typical of this class of enzymes, however, distances inside the trinuclear copper cluster are indicative of a reduction of the metal centers induced by free electrons produced during the X-ray data collection. UV-visible spectra collected during the X-ray exposure support the progressive reduction of the metal centers. In order to better detect the reduction progression steps in the trinuclear copper site, a multicrystal data collection strategy based on a systematic spread of the X-ray dose over many crystals has been employed. This approach is based on collecting multicrystal data sets, then combining the slices of the individual data sets experiencing the same radiation dose to obtain composite complete data sets at progressively higher doses. Applying this technique, we have been able to capture sequential frames of the enzyme during the metal centers and molecular oxygen reduction mechanism obtaining a three-dimensional movie of the X-ray-driven catalytic conversion of the molecular oxygen in the active site of laccase: first, the copper ions reduction, then the molecular oxygen binding and its reductive splitting, thus allowing to reconstruct the entire catalytic cycle for multicopper oxidases.
从 Steccherinum ochraceum 中提取的蓝色漆酶的晶体结构已通过经典的单晶数据采集在 2.0Å 的分辨率下解决。整体结构特征是该酶类的典型特征,但是三核铜簇内的距离表明金属中心由于在 X 射线数据采集过程中产生的自由电子而被还原。在 X 射线照射过程中收集的紫外可见光谱支持金属中心的逐步还原。为了更好地检测三核铜位的还原进展步骤,采用了一种基于将 X 射线剂量系统地分布在多个晶体上的多晶体数据采集策略。该方法基于收集多晶体数据集,然后将经历相同辐射剂量的各个数据集的切片组合在一起,以在逐渐增加的剂量下获得复合完整数据集。应用该技术,我们能够在金属中心和分子氧还原机制期间捕获酶的连续帧,从而获得漆酶活性位点中分子氧的 X 射线驱动催化转化的三维电影:首先是铜离子还原,然后是分子氧结合及其还原分裂,从而能够重建多铜氧化酶的整个催化循环。