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分离和鉴定栖息于锯末和咖啡渣堆肥中的纤维素分解菌。

Isolation and characterization of cellulose-decomposing bacteria inhabiting sawdust and coffee residue composts.

机构信息

Graduate School of Biosphere Science, Hiroshima University, Japan.

出版信息

Microbes Environ. 2012;27(3):226-33. doi: 10.1264/jsme2.me11299. Epub 2012 Feb 22.

Abstract

Clarifying the identity and enzymatic activities of microorganisms associated with the decomposition of organic materials is expected to contribute to the evaluation and improvement of composting processes. In this study, we examined the cellulolytic and hemicellulolytic abilities of bacteria isolated from sawdust compost (SDC) and coffee residue compost (CRC). Cellulolytic bacteria were isolated using Dubos mineral salt agar containing azurine cross-linked (AZCL) HE-cellulose. Bacterial identification was performed based on the sequence analysis of 16S rRNA genes, and cellulase, xylanase, β-glucanase, mannanase, and protease activities were characterized using insoluble AZCL-linked substrates. Eleven isolates were obtained from SDC and 10 isolates from CRC. DNA analysis indicated that the isolates from SDC and CRC belonged to the genera Streptomyces, Microbispora, and Paenibacillus, and the genera Streptomyces, Microbispora, and Cohnella, respectively. Microbispora was the most dominant genus in both compost types. All isolates, with the exception of two isolates lacking mannanase activity, showed cellulase, xylanase, β-glucanase, and mannanase activities. Based on enzyme activities expressed as the ratio of hydrolysis zone diameter to colony diameter, it was suggested that the species of Microbispora (SDCB8, SDCB9) and Paenibacillus (SDCB10, SDCB11) in SDC and Microbispora (CRCB2, CRCB6) and Cohnella (CRCB9, CRCB10) in CRC contribute to efficient cellulolytic and hemicellulolytic processes during composting.

摘要

阐明与有机材料分解相关的微生物的身份和酶活性有望有助于评估和改进堆肥过程。在这项研究中,我们研究了从木屑堆肥(SDC)和咖啡残渣堆肥(CRC)中分离的细菌的纤维素和半纤维素分解能力。使用含有偶氮蓝-cross-linked(AZCL)HE-纤维素的 Dubos 矿物盐琼脂分离纤维素分解细菌。根据 16S rRNA 基因的序列分析进行细菌鉴定,并使用不溶性 AZCL 连接的底物表征纤维素酶、木聚糖酶、β-葡聚糖酶、甘露聚糖酶和蛋白酶活性。从 SDC 获得了 11 个分离株,从 CRC 获得了 10 个分离株。DNA 分析表明,SDC 和 CRC 的分离株分别属于链霉菌属、微杆菌属和芽孢杆菌属,以及链霉菌属、微杆菌属和科内拉属。微杆菌属在这两种堆肥类型中都是最主要的属。除了两个缺乏甘露聚糖酶活性的分离株外,所有分离株均表现出纤维素酶、木聚糖酶、β-葡聚糖酶和甘露聚糖酶活性。根据水解区直径与菌落直径之比表示的酶活性,表明链霉菌属(SDCB8、SDCB9)和芽孢杆菌属(SDCB10、SDCB11)在 SDC 中的种,以及微杆菌属(CRCB2、CRCB6)和科内拉属(CRCB9、CRCB10)在 CRC 中可能有助于堆肥过程中高效的纤维素和半纤维素分解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93a8/4036048/947852a52d26/27_226f1.jpg

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