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在奇瓦瓦沙漠中进行纤维素分解放线菌的系统生物勘探:分离和酶谱分析。

Systematic bioprospection for cellulolytic actinomycetes in the Chihuahuan Desert: isolation and enzymatic profiling.

机构信息

Universidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Instituto de Biotecnología, San Nicolás de los Garza, Nuevo León, México.

出版信息

PeerJ. 2023 Sep 28;11:e16119. doi: 10.7717/peerj.16119. eCollection 2023.

Abstract

The quest for microbial cellulases has intensified as a response to global challenges in biofuel production. The efficient deconstruction of lignocellulosic biomass holds promise for generating valuable products in various industries such as food, textile, and detergents. This article presents a systematic bioprospection aimed at isolating actinomycetes with exceptional cellulose deconstruction capabilities. Our methodology explored the biodiverse oligotrophic region of Cuatro Cienegas, Coahuila, within the Chihuahuan Desert. Among the evaluated actinomycetes collection, 78% exhibited cellulolytic activity. Through a meticulous screening process based on enzymatic index evaluation, we identified a highly cellulolytic strain for further investigation. Submerged fermentation of this strain revealed an endoglucanase enzymatic activity of 149 U/mg. Genomic analysis of strain sp. STCH565-A revealed unique configurations of carbohydrate-active enzyme (CAZyme) genes, underscoring its potential for lignocellulosic bioconversion applications. These findings not only highlight the significance of the Chihuahuan Desert as a rich source of cellulolytic microorganisms but also offer insights into the systematic exploration and selection of high-performing cellulolytic microorganisms for application in diverse environmental contexts. In conclusion, our bioprospecting study lays a foundation for harnessing the cellulolytic potential of actinomycetes from the Chihuahuan Desert, with implications for advancing cellulose deconstruction processes in various industries. The findings can serve as a blueprint for future bioprospecting efforts in different regions, facilitating the targeted discovery of microorganisms with exceptional cellulosic deconstruction capabilities.

摘要

作为应对生物燃料生产中全球挑战的一种回应,对微生物纤维素酶的探索变得更加迫切。木质纤维素生物质的高效解构有望在食品、纺织和洗涤剂等各个行业产生有价值的产品。本文提出了一种系统的生物勘探方法,旨在分离具有卓越纤维素解构能力的放线菌。我们的方法探索了位于奇瓦瓦沙漠中的科阿韦拉州四泉谷的生物多样性贫营养区。在所评估的放线菌收集物中,有 78%表现出纤维素酶活性。通过基于酶指数评估的细致筛选过程,我们鉴定出了一种具有高度纤维素分解能力的菌株,以供进一步研究。对该菌株进行的深层发酵揭示了其内切葡聚糖酶酶活为 149 U/mg。对菌株 sp. STCH565-A 的基因组分析揭示了独特的碳水化合物活性酶(CAZyme)基因配置,突出了其在木质纤维素生物转化应用中的潜力。这些发现不仅强调了奇瓦瓦沙漠作为纤维素分解微生物丰富来源的重要性,还为在不同环境背景下系统探索和选择高性能纤维素分解微生物应用提供了新的见解。总之,我们的生物勘探研究为利用奇瓦瓦沙漠放线菌的纤维素酶潜力奠定了基础,对推进各个行业的纤维素解构过程具有重要意义。该研究结果可以为未来在不同地区的生物勘探工作提供蓝图,有助于有针对性地发现具有卓越纤维素解构能力的微生物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da0b/10542393/29b389401ab6/peerj-11-16119-g001.jpg

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