Organic Chemistry Laboratory, HCI H333, ETH-Hönggerberg, Zurich, Switzerland.
J Phys Chem B. 2012 Jun 14;116(23):6740-50. doi: 10.1021/jp212094d. Epub 2012 Mar 15.
Crystal structures of chiral and racemic proteogenic amino acids are compared, over a database of 40 crystal structures and 20 chiral-racemic pairs. Wallach's rule does not apply. Solubility data show that the racemates tend to be slightly more stable than their chiral counterparts. Lattice energies are calculated by semiempirical PIXEL methods and by several ab initio methods, which also yield molecular energies. Results, especially molecular energies, are sensitive to small structural differences and therefore depend on the crystal structure accuracy. Surface effects in crystals of zwitterionic molecules require special attention. Energy differences between chiral and racemic crystals are typically around 10 kJ mol(-1), roughly the limit of our calculations. These suggest, however, that crystal stability tends to increase with decreasing crystal density, a result possibly related to the strong directionality of hydrogen bonds. The analysis of interaction energies between molecules related by specific symmetry operations shows that stabilization in homochiral crystal structures comes mainly from formation of screw-symmetric ribbons, whereas racemic crystal structures preferentially exhibit strongly stabilizing centrosymmetric dimers.
比较了 40 个晶体结构和 20 对手性-外消旋对的手性和外消旋蛋白源氨基酸的晶体结构。Wallach 规则不适用。溶解度数据表明,外消旋体往往比其手性对应物略稳定。通过半经验 PIXEL 方法和几种从头算方法计算晶格能,也得到分子能量。结果,特别是分子能量,对微小的结构差异很敏感,因此取决于晶体结构的准确性。两性离子分子晶体中的表面效应需要特别注意。手性和外消旋晶体之间的能量差异通常在 10 kJ mol(-1)左右,大致是我们计算的极限。然而,这表明晶体稳定性随着晶体密度的降低而增加,这一结果可能与氢键的强烈方向性有关。通过分析通过特定对称操作相关的分子之间的相互作用能,表明在同手性晶体结构中稳定化主要来自螺旋对称带的形成,而外消旋晶体结构则优先表现出强烈稳定的中心对称二聚体。