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黄德美菌属新种和沉积物德美菌属新种,从海沉积物中分离得到。

Demequina flava sp. nov. and Demequina sediminicola sp. nov., isolated from sea sediment.

机构信息

Division of Applied Biological Sciences, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Takeda-4, Kofu, Yamanashi 400-8511, Japan.

NITE Biological Resource Center (NBRC), National Institute of Technology and Evaluation, 2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan.

出版信息

Int J Syst Evol Microbiol. 2013 Jan;63(Pt 1):249-253. doi: 10.1099/ijs.0.039297-0. Epub 2012 Mar 2.

Abstract

Two novel Gram-stain-positive bacteria, designated HR08-7(T) and HR08-43(T), were isolated from a sea sediment sample from Rishiri Island, Hokkaido, Japan, and their taxonomic positions were investigated by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that strains HR08-7(T) and HR08-43(T) and the members of the genus Demequina formed a monophyletic cluster with similarity range of 95.5-99.0 %. The peptidoglycan type of strains HR08-7(T) and HR08-43(T) was A4β. The predominant menaquinone of both strains was demethylmenaquinone DMK-9(H(4)) and the major fatty acid was anteiso-C(15 : 0). The DNA G+C contents of strains HR08-7(T) and HR08-43(T) were 64.5 and 62.4 mol%, respectively. The results of phylogenetic analysis and DNA-DNA hybridization, along with differences of strains HR08-7(T) and HR08-43(T) from the recognized Demequina species in phenotypic characteristics, indicate that the two strains merit classification as representatives of two novel species of the genus Demequina, for which the names Demequina flava sp. nov. and Demequina sediminicola sp. nov. are proposed; the type strains are HR08-7(T) (= NBRC 105854(T) = DSM 24865(T)) and HR08-43(T) (= NBRC 105855(T) = DSM 24867(T)), respectively.

摘要

两株新型革兰氏阳性细菌,HR08-7(T)和 HR08-43(T),从日本北海道利尻岛的海泥样本中分离出来,并通过多相分类方法研究了它们的分类地位。基于 16S rRNA 基因序列比较的系统发育分析表明,菌株 HR08-7(T)和 HR08-43(T)与 Demequina 属的成员形成了一个单系聚类,相似性范围为 95.5-99.0%。菌株 HR08-7(T)和 HR08-43(T)的肽聚糖类型为 A4β。两株菌的主要menaquinone 为 demethylmenaquinone DMK-9(H(4)),主要脂肪酸为 anteiso-C(15 : 0)。菌株 HR08-7(T)和 HR08-43(T)的 DNA G+C 含量分别为 64.5 和 62.4 mol%。系统发育分析和 DNA-DNA 杂交的结果,以及菌株 HR08-7(T)和 HR08-43(T)与公认的 Demequina 种在表型特征上的差异,表明这两株菌值得分类为 Demequina 属的两个新种的代表,分别命名为 Demequina flava sp. nov. 和 Demequina sediminicola sp. nov.;其模式菌株分别为 HR08-7(T)=NBRC 105854(T)=DSM 24865(T)和 HR08-43(T)=NBRC 105855(T)=DSM 24867(T)。

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